Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b6P59708 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b6P59708 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b6P59708 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b6P59708 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.37□□□□□ -0.27
Sf3b6P59708 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b6P59708 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b6P59708 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b6P59708 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b6P59708 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.37□□□□□ -0.27
Sf3b6P59708 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.37□□□□□ -0.27
Sf3b6P59708 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b6P59708 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.37□□□□□ -0.27
Sf3b6P59708 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b6P59708 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b6P59708 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b6P59708 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b6P59708 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b6P59708 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Sf3b6P59708 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Sf3b6P59708 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Sf3b6P59708 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b6P59708 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.37□□□□□ -0.27
Sf3b6P59708 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Sf3b6P59708 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b6P59708 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b6P59708 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b6P59708 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b6P59708 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Sf3b6P59708 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Sf3b6P59708 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Sf3b6P59708 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b6P59708 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b6P59708 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b6P59708 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b6P59708 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Sf3b6P59708 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b6P59708 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.36□□□□□ -0.27
Sf3b6P59708 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b6P59708 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Sf3b6P59708 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b6P59708 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b6P59708 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b6P59708 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.36□□□□□ -0.27
Sf3b6P59708 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b6P59708 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.36□□□□□ -0.27
Sf3b6P59708 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.36□□□□□ -0.27
Sf3b6P59708 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.36□□□□□ -0.27
Sf3b6P59708 AC154471.1-201ENSMUST00000224418 436 ntBASIC13.36□□□□□ -0.27
Sf3b6P59708 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b6P59708 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b6P59708 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b6P59708 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b6P59708 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b6P59708 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b6P59708 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b6P59708 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b6P59708 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b6P59708 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b6P59708 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.36□□□□□ -0.27
Sf3b6P59708 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b6P59708 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3b6P59708 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.35□□□□□ -0.27
Sf3b6P59708 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3b6P59708 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3b6P59708 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.35□□□□□ -0.27
Sf3b6P59708 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3b6P59708 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3b6P59708 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3b6P59708 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3b6P59708 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Sf3b6P59708 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3b6P59708 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3b6P59708 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3b6P59708 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3b6P59708 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3b6P59708 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3b6P59708 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Sf3b6P59708 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3b6P59708 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3b6P59708 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3b6P59708 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3b6P59708 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.35□□□□□ -0.27
Sf3b6P59708 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3b6P59708 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Sf3b6P59708 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3b6P59708 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3b6P59708 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.35□□□□□ -0.27
Sf3b6P59708 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Sf3b6P59708 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3b6P59708 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3b6P59708 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3b6P59708 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Sf3b6P59708 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3b6P59708 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3b6P59708 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Sf3b6P59708 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sf3b6P59708 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sf3b6P59708 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sf3b6P59708 Grk6-207ENSMUST00000225925 2769 ntBASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms