Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tpm1P58771 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Tpm1P58771 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tpm1P58771 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tpm1P58771 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC16.81■□□□□ 0.28
Tpm1P58771 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tpm1P58771 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tpm1P58771 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tpm1P58771 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Tpm1P58771 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tpm1P58771 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tpm1P58771 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Tpm1P58771 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tpm1P58771 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tpm1P58771 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tpm1P58771 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tpm1P58771 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tpm1P58771 Gm45328-201ENSMUST00000210942 917 ntBASIC16.8■□□□□ 0.28
Tpm1P58771 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tpm1P58771 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tpm1P58771 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tpm1P58771 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tpm1P58771 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tpm1P58771 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tpm1P58771 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Tpm1P58771 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tpm1P58771 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Tpm1P58771 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Tpm1P58771 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Tpm1P58771 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tpm1P58771 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC16.79■□□□□ 0.28
Tpm1P58771 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Tpm1P58771 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tpm1P58771 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tpm1P58771 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tpm1P58771 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tpm1P58771 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tpm1P58771 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tpm1P58771 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tpm1P58771 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tpm1P58771 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tpm1P58771 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tpm1P58771 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tpm1P58771 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tpm1P58771 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Tpm1P58771 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tpm1P58771 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tpm1P58771 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Tpm1P58771 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.79■□□□□ 0.28
Tpm1P58771 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.79■□□□□ 0.28
Tpm1P58771 Gm5587-201ENSMUST00000206270 674 ntBASIC16.79■□□□□ 0.28
Tpm1P58771 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.79■□□□□ 0.28
Tpm1P58771 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Tpm1P58771 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tpm1P58771 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tpm1P58771 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tpm1P58771 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tpm1P58771 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tpm1P58771 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tpm1P58771 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tpm1P58771 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Tpm1P58771 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tpm1P58771 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tpm1P58771 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tpm1P58771 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tpm1P58771 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tpm1P58771 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tpm1P58771 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
Tpm1P58771 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tpm1P58771 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Tpm1P58771 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tpm1P58771 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Tpm1P58771 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tpm1P58771 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tpm1P58771 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tpm1P58771 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tpm1P58771 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tpm1P58771 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tpm1P58771 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tpm1P58771 Gm13312-201ENSMUST00000119631 718 ntBASIC16.78■□□□□ 0.28
Tpm1P58771 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Tpm1P58771 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.78■□□□□ 0.28
Tpm1P58771 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.78■□□□□ 0.28
Tpm1P58771 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Tpm1P58771 Gm19164-201ENSMUST00000210667 640 ntBASIC16.78■□□□□ 0.28
Tpm1P58771 Gm9172-201ENSMUST00000212092 954 ntBASIC16.78■□□□□ 0.28
Tpm1P58771 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Tpm1P58771 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tpm1P58771 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Tpm1P58771 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tpm1P58771 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tpm1P58771 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Tpm1P58771 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tpm1P58771 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tpm1P58771 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Tpm1P58771 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tpm1P58771 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tpm1P58771 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Tpm1P58771 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tpm1P58771 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms