Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Ctdsp1P58466 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC11.79□□□□□ -0.52
Ctdsp1P58466 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Ctdsp1P58466 Gm13158-201ENSMUST00000122007 736 ntBASIC11.79□□□□□ -0.52
Ctdsp1P58466 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ctdsp1P58466 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ctdsp1P58466 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Ctdsp1P58466 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC11.79□□□□□ -0.52
Ctdsp1P58466 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ctdsp1P58466 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Ctdsp1P58466 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ctdsp1P58466 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ctdsp1P58466 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Ctdsp1P58466 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ctdsp1P58466 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ctdsp1P58466 Gm21596-201ENSMUST00000178049 1316 ntBASIC11.79□□□□□ -0.52
Ctdsp1P58466 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ctdsp1P58466 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ctdsp1P58466 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Ctdsp1P58466 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ctdsp1P58466 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Ctdsp1P58466 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Ctdsp1P58466 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ctdsp1P58466 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ctdsp1P58466 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ctdsp1P58466 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ctdsp1P58466 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Ctdsp1P58466 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Ctdsp1P58466 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ctdsp1P58466 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Ctdsp1P58466 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ctdsp1P58466 Dio3-201ENSMUST00000097228 1449 ntBASIC11.78□□□□□ -0.52
Ctdsp1P58466 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ctdsp1P58466 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ctdsp1P58466 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ctdsp1P58466 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ctdsp1P58466 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ctdsp1P58466 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ctdsp1P58466 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC11.78□□□□□ -0.52
Ctdsp1P58466 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ctdsp1P58466 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ctdsp1P58466 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ctdsp1P58466 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
Ctdsp1P58466 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ctdsp1P58466 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ctdsp1P58466 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Ctdsp1P58466 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ctdsp1P58466 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ctdsp1P58466 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ctdsp1P58466 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ctdsp1P58466 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ctdsp1P58466 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ctdsp1P58466 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ctdsp1P58466 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Ctdsp1P58466 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ctdsp1P58466 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ctdsp1P58466 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ctdsp1P58466 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC11.78□□□□□ -0.52
Ctdsp1P58466 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ctdsp1P58466 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ctdsp1P58466 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ctdsp1P58466 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ctdsp1P58466 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.78□□□□□ -0.52
Ctdsp1P58466 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ctdsp1P58466 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ctdsp1P58466 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC11.78□□□□□ -0.52
Ctdsp1P58466 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ctdsp1P58466 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ctdsp1P58466 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ctdsp1P58466 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ctdsp1P58466 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ctdsp1P58466 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC11.77□□□□□ -0.52
Ctdsp1P58466 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Ctdsp1P58466 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.52
Ctdsp1P58466 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ctdsp1P58466 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ctdsp1P58466 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ctdsp1P58466 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ctdsp1P58466 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ctdsp1P58466 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ctdsp1P58466 Gm18244-201ENSMUST00000219747 1566 ntBASIC11.77□□□□□ -0.53
Ctdsp1P58466 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ctdsp1P58466 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Ctdsp1P58466 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ctdsp1P58466 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Ctdsp1P58466 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC11.77□□□□□ -0.53
Ctdsp1P58466 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Ctdsp1P58466 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ctdsp1P58466 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC11.77□□□□□ -0.53
Ctdsp1P58466 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ctdsp1P58466 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ctdsp1P58466 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ctdsp1P58466 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ctdsp1P58466 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ctdsp1P58466 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Ctdsp1P58466 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Ctdsp1P58466 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ctdsp1P58466 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Ctdsp1P58466 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ctdsp1P58466 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms