Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdkn2bP55271 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdkn2bP55271 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdkn2bP55271 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdkn2bP55271 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cdkn2bP55271 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Cdkn2bP55271 Gm12895-201ENSMUST00000122214 226 ntBASIC14.43□□□□□ -0.1
Cdkn2bP55271 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdkn2bP55271 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cdkn2bP55271 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cdkn2bP55271 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.43□□□□□ -0.1
Cdkn2bP55271 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.43□□□□□ -0.1
Cdkn2bP55271 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdkn2bP55271 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdkn2bP55271 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Cdkn2bP55271 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Cdkn2bP55271 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cdkn2bP55271 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Cdkn2bP55271 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cdkn2bP55271 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdkn2bP55271 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Cdkn2bP55271 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Cdkn2bP55271 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdkn2bP55271 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdkn2bP55271 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdkn2bP55271 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.42□□□□□ -0.1
Cdkn2bP55271 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.42□□□□□ -0.1
Cdkn2bP55271 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Cdkn2bP55271 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkn2bP55271 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkn2bP55271 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkn2bP55271 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Cdkn2bP55271 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkn2bP55271 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkn2bP55271 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkn2bP55271 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkn2bP55271 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkn2bP55271 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkn2bP55271 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Cdkn2bP55271 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkn2bP55271 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.42□□□□□ -0.1
Cdkn2bP55271 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkn2bP55271 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Cdkn2bP55271 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkn2bP55271 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkn2bP55271 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.42□□□□□ -0.1
Cdkn2bP55271 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkn2bP55271 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkn2bP55271 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkn2bP55271 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkn2bP55271 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkn2bP55271 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdkn2bP55271 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdkn2bP55271 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdkn2bP55271 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdkn2bP55271 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdkn2bP55271 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.41□□□□□ -0.1
Cdkn2bP55271 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdkn2bP55271 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.41□□□□□ -0.1
Cdkn2bP55271 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.41□□□□□ -0.1
Cdkn2bP55271 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.41□□□□□ -0.1
Cdkn2bP55271 Gm7284-201ENSMUST00000131667 944 ntBASIC14.41□□□□□ -0.1
Cdkn2bP55271 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.41□□□□□ -0.1
Cdkn2bP55271 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.41□□□□□ -0.1
Cdkn2bP55271 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdkn2bP55271 Gm6296-201ENSMUST00000222599 943 ntBASIC14.41□□□□□ -0.1
Cdkn2bP55271 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdkn2bP55271 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdkn2bP55271 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Cdkn2bP55271 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdkn2bP55271 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdkn2bP55271 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.41□□□□□ -0.1
Cdkn2bP55271 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdkn2bP55271 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdkn2bP55271 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.41□□□□□ -0.1
Cdkn2bP55271 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdkn2bP55271 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdkn2bP55271 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdkn2bP55271 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdkn2bP55271 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cdkn2bP55271 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdkn2bP55271 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdkn2bP55271 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdkn2bP55271 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cdkn2bP55271 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cdkn2bP55271 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdkn2bP55271 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Cdkn2bP55271 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Cdkn2bP55271 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cdkn2bP55271 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.4□□□□□ -0.1
Cdkn2bP55271 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdkn2bP55271 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdkn2bP55271 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdkn2bP55271 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdkn2bP55271 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdkn2bP55271 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cdkn2bP55271 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.4□□□□□ -0.1
Cdkn2bP55271 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdkn2bP55271 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdkn2bP55271 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms