Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Msh6P54276 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Msh6P54276 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Msh6P54276 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Msh6P54276 Gm14026-201ENSMUST00000120625 1789 ntBASIC18.96■□□□□ 0.63
Msh6P54276 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Msh6P54276 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Msh6P54276 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Msh6P54276 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Msh6P54276 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Msh6P54276 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Msh6P54276 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC18.96■□□□□ 0.62
Msh6P54276 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.62
Msh6P54276 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Msh6P54276 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Msh6P54276 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Msh6P54276 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Msh6P54276 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Msh6P54276 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC18.95■□□□□ 0.62
Msh6P54276 AC135669.1-201ENSMUST00000213585 412 ntBASIC18.95■□□□□ 0.62
Msh6P54276 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Msh6P54276 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC18.95■□□□□ 0.62
Msh6P54276 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Msh6P54276 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC18.95■□□□□ 0.62
Msh6P54276 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Msh6P54276 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC18.95■□□□□ 0.62
Msh6P54276 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Msh6P54276 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Msh6P54276 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Msh6P54276 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Msh6P54276 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Msh6P54276 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Msh6P54276 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Msh6P54276 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Msh6P54276 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC18.95■□□□□ 0.62
Msh6P54276 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Msh6P54276 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Msh6P54276 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Msh6P54276 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Msh6P54276 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Msh6P54276 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Msh6P54276 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC18.95■□□□□ 0.62
Msh6P54276 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Msh6P54276 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
Msh6P54276 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Msh6P54276 Gm27838-201ENSMUST00000184829 128 ntBASIC18.94■□□□□ 0.62
Msh6P54276 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Msh6P54276 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Msh6P54276 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Msh6P54276 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Msh6P54276 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Msh6P54276 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC18.94■□□□□ 0.62
Msh6P54276 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Msh6P54276 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Msh6P54276 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Msh6P54276 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC18.94■□□□□ 0.62
Msh6P54276 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Msh6P54276 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Msh6P54276 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Msh6P54276 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Msh6P54276 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Msh6P54276 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Msh6P54276 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Msh6P54276 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Msh6P54276 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Msh6P54276 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Msh6P54276 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Msh6P54276 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Msh6P54276 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Msh6P54276 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Msh6P54276 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC18.94■□□□□ 0.62
Msh6P54276 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC18.93■□□□□ 0.62
Msh6P54276 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC18.93■□□□□ 0.62
Msh6P54276 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Msh6P54276 Gm44344-201ENSMUST00000200287 129 ntBASIC18.93■□□□□ 0.62
Msh6P54276 Klk2-ps-201ENSMUST00000205342 571 ntBASIC18.93■□□□□ 0.62
Msh6P54276 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Msh6P54276 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Msh6P54276 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Msh6P54276 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Msh6P54276 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Msh6P54276 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Msh6P54276 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Msh6P54276 Gm43195-201ENSMUST00000200614 2332 ntBASIC18.93■□□□□ 0.62
Msh6P54276 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Msh6P54276 Syt7-205ENSMUST00000224135 1557 ntBASIC18.93■□□□□ 0.62
Msh6P54276 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Msh6P54276 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Msh6P54276 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
Msh6P54276 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Msh6P54276 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Msh6P54276 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Msh6P54276 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Msh6P54276 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Msh6P54276 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Msh6P54276 Gm6539-201ENSMUST00000119157 1064 ntBASIC18.93■□□□□ 0.62
Msh6P54276 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC18.93■□□□□ 0.62
Msh6P54276 AC124732.1-201ENSMUST00000221551 910 ntBASIC18.93■□□□□ 0.62
Msh6P54276 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC18.93■□□□□ 0.62
Msh6P54276 Gm3365-201ENSMUST00000216296 1480 ntBASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms