Protein–RNA interactions for Protein: P49962

Srp9, Signal recognition particle 9 kDa protein, mousemouse

Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp9P49962 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Srp9P49962 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.84□□□□□ -0.35
Srp9P49962 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Srp9P49962 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Srp9P49962 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Srp9P49962 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Srp9P49962 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Srp9P49962 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Srp9P49962 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Srp9P49962 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Srp9P49962 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Srp9P49962 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Srp9P49962 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Srp9P49962 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC12.83□□□□□ -0.36
Srp9P49962 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Srp9P49962 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.83□□□□□ -0.36
Srp9P49962 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC12.83□□□□□ -0.36
Srp9P49962 Gm9172-201ENSMUST00000212092 954 ntBASIC12.83□□□□□ -0.36
Srp9P49962 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Srp9P49962 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC12.83□□□□□ -0.36
Srp9P49962 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Srp9P49962 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.83□□□□□ -0.36
Srp9P49962 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Srp9P49962 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Srp9P49962 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Srp9P49962 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Srp9P49962 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Srp9P49962 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Srp9P49962 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Srp9P49962 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Srp9P49962 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Srp9P49962 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Srp9P49962 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Srp9P49962 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Srp9P49962 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Srp9P49962 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Srp9P49962 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Srp9P49962 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Srp9P49962 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Srp9P49962 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Srp9P49962 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Srp9P49962 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Srp9P49962 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Srp9P49962 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Srp9P49962 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Srp9P49962 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Srp9P49962 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Srp9P49962 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Srp9P49962 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Srp9P49962 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Srp9P49962 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Srp9P49962 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Srp9P49962 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Srp9P49962 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC12.82□□□□□ -0.36
Srp9P49962 Gm15165-201ENSMUST00000118140 502 ntBASIC12.82□□□□□ -0.36
Srp9P49962 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Srp9P49962 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Srp9P49962 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC12.82□□□□□ -0.36
Srp9P49962 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.82□□□□□ -0.36
Srp9P49962 AC108846.1-201ENSMUST00000214531 513 ntBASIC12.82□□□□□ -0.36
Srp9P49962 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Srp9P49962 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Srp9P49962 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Srp9P49962 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Srp9P49962 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Srp9P49962 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Srp9P49962 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Srp9P49962 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Srp9P49962 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.82□□□□□ -0.36
Srp9P49962 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Srp9P49962 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.82□□□□□ -0.36
Srp9P49962 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Srp9P49962 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Srp9P49962 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Srp9P49962 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Srp9P49962 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Srp9P49962 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Srp9P49962 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Srp9P49962 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Srp9P49962 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.81□□□□□ -0.36
Srp9P49962 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Srp9P49962 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Srp9P49962 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Srp9P49962 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Srp9P49962 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Srp9P49962 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Srp9P49962 Gm12134-201ENSMUST00000122109 520 ntBASIC12.81□□□□□ -0.36
Srp9P49962 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Srp9P49962 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Srp9P49962 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Srp9P49962 Gm27357-201ENSMUST00000183754 135 ntBASIC12.81□□□□□ -0.36
Srp9P49962 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Srp9P49962 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Srp9P49962 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Srp9P49962 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Srp9P49962 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Srp9P49962 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Srp9P49962 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Srp9P49962 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Srp9P49962 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms