Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
GdnfP48540 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
GdnfP48540 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
GdnfP48540 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.2□□□□□ -0.3
GdnfP48540 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
GdnfP48540 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
GdnfP48540 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GdnfP48540 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
GdnfP48540 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
GdnfP48540 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
GdnfP48540 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
GdnfP48540 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GdnfP48540 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
GdnfP48540 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GdnfP48540 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GdnfP48540 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GdnfP48540 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
GdnfP48540 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GdnfP48540 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
GdnfP48540 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GdnfP48540 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
GdnfP48540 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GdnfP48540 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GdnfP48540 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
GdnfP48540 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC13.19□□□□□ -0.3
GdnfP48540 Gm28033-201ENSMUST00000184224 96 ntBASIC13.19□□□□□ -0.3
GdnfP48540 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC13.19□□□□□ -0.3
GdnfP48540 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC13.19□□□□□ -0.3
GdnfP48540 Gm44454-201ENSMUST00000198541 138 ntBASIC13.19□□□□□ -0.3
GdnfP48540 Gm18669-201ENSMUST00000216049 778 ntBASIC13.19□□□□□ -0.3
GdnfP48540 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.19□□□□□ -0.3
GdnfP48540 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GdnfP48540 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GdnfP48540 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GdnfP48540 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GdnfP48540 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GdnfP48540 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
GdnfP48540 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GdnfP48540 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GdnfP48540 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GdnfP48540 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GdnfP48540 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GdnfP48540 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GdnfP48540 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GdnfP48540 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GdnfP48540 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GdnfP48540 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GdnfP48540 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
GdnfP48540 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GdnfP48540 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
GdnfP48540 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GdnfP48540 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GdnfP48540 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GdnfP48540 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GdnfP48540 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.18□□□□□ -0.3
GdnfP48540 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
GdnfP48540 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GdnfP48540 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GdnfP48540 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
GdnfP48540 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
GdnfP48540 Gm12895-201ENSMUST00000122214 226 ntBASIC13.18□□□□□ -0.3
GdnfP48540 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC13.18□□□□□ -0.3
GdnfP48540 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13.18□□□□□ -0.3
GdnfP48540 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GdnfP48540 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
GdnfP48540 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GdnfP48540 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
GdnfP48540 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
GdnfP48540 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
GdnfP48540 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GdnfP48540 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GdnfP48540 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
GdnfP48540 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GdnfP48540 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.18□□□□□ -0.3
GdnfP48540 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GdnfP48540 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
GdnfP48540 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GdnfP48540 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
GdnfP48540 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
GdnfP48540 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
GdnfP48540 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GdnfP48540 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GdnfP48540 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GdnfP48540 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
GdnfP48540 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
GdnfP48540 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
GdnfP48540 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GdnfP48540 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.17□□□□□ -0.3
GdnfP48540 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
GdnfP48540 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
GdnfP48540 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GdnfP48540 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GdnfP48540 Gm15165-201ENSMUST00000118140 502 ntBASIC13.17□□□□□ -0.3
GdnfP48540 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13.17□□□□□ -0.3
GdnfP48540 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
GdnfP48540 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GdnfP48540 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
GdnfP48540 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13.17□□□□□ -0.3
GdnfP48540 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
GdnfP48540 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms