Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox2P48432 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox2P48432 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox2P48432 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox2P48432 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox2P48432 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sox2P48432 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Sox2P48432 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Sox2P48432 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.13□□□□□ -0.15
Sox2P48432 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.13□□□□□ -0.15
Sox2P48432 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.13□□□□□ -0.15
Sox2P48432 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox2P48432 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.13□□□□□ -0.15
Sox2P48432 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox2P48432 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sox2P48432 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.13□□□□□ -0.15
Sox2P48432 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox2P48432 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Sox2P48432 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.13□□□□□ -0.15
Sox2P48432 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox2P48432 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox2P48432 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sox2P48432 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox2P48432 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox2P48432 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Sox2P48432 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox2P48432 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sox2P48432 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox2P48432 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.12□□□□□ -0.15
Sox2P48432 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Sox2P48432 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Sox2P48432 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Sox2P48432 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox2P48432 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox2P48432 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox2P48432 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Sox2P48432 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox2P48432 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox2P48432 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sox2P48432 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sox2P48432 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Sox2P48432 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Sox2P48432 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox2P48432 Mir6982-201ENSMUST00000184354 68 ntBASIC14.12□□□□□ -0.15
Sox2P48432 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.12□□□□□ -0.15
Sox2P48432 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox2P48432 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox2P48432 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.12□□□□□ -0.15
Sox2P48432 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.12□□□□□ -0.15
Sox2P48432 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox2P48432 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox2P48432 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox2P48432 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox2P48432 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox2P48432 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Sox2P48432 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox2P48432 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox2P48432 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Sox2P48432 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox2P48432 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox2P48432 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Sox2P48432 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox2P48432 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox2P48432 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sox2P48432 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox2P48432 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox2P48432 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox2P48432 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.11□□□□□ -0.15
Sox2P48432 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Sox2P48432 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sox2P48432 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.11□□□□□ -0.15
Sox2P48432 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.11□□□□□ -0.15
Sox2P48432 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.11□□□□□ -0.15
Sox2P48432 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox2P48432 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox2P48432 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sox2P48432 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Sox2P48432 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox2P48432 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Sox2P48432 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox2P48432 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox2P48432 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox2P48432 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox2P48432 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Sox2P48432 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Sox2P48432 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Sox2P48432 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sox2P48432 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox2P48432 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox2P48432 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sox2P48432 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sox2P48432 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sox2P48432 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox2P48432 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox2P48432 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox2P48432 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Sox2P48432 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox2P48432 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox2P48432 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox2P48432 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms