Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Rfx3P48381 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfx3P48381 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfx3P48381 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.61□□□□□ -0.23
Rfx3P48381 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfx3P48381 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfx3P48381 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfx3P48381 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfx3P48381 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfx3P48381 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfx3P48381 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfx3P48381 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfx3P48381 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfx3P48381 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.61□□□□□ -0.23
Rfx3P48381 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Rfx3P48381 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfx3P48381 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfx3P48381 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.61□□□□□ -0.23
Rfx3P48381 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfx3P48381 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.6□□□□□ -0.23
Rfx3P48381 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfx3P48381 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rfx3P48381 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfx3P48381 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Rfx3P48381 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfx3P48381 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Rfx3P48381 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.6□□□□□ -0.23
Rfx3P48381 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfx3P48381 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfx3P48381 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Rfx3P48381 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC13.6□□□□□ -0.23
Rfx3P48381 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfx3P48381 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Rfx3P48381 Gm8097-201ENSMUST00000117903 829 ntBASIC13.6□□□□□ -0.23
Rfx3P48381 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rfx3P48381 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.6□□□□□ -0.23
Rfx3P48381 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfx3P48381 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Rfx3P48381 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rfx3P48381 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfx3P48381 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.6□□□□□ -0.23
Rfx3P48381 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Rfx3P48381 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfx3P48381 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rfx3P48381 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rfx3P48381 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.59□□□□□ -0.23
Rfx3P48381 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rfx3P48381 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rfx3P48381 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rfx3P48381 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rfx3P48381 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Rfx3P48381 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rfx3P48381 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rfx3P48381 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.59□□□□□ -0.23
Rfx3P48381 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rfx3P48381 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rfx3P48381 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rfx3P48381 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rfx3P48381 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Rfx3P48381 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rfx3P48381 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rfx3P48381 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rfx3P48381 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.59□□□□□ -0.23
Rfx3P48381 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC13.59□□□□□ -0.23
Rfx3P48381 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Rfx3P48381 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.59□□□□□ -0.23
Rfx3P48381 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rfx3P48381 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rfx3P48381 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rfx3P48381 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Rfx3P48381 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rfx3P48381 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.59□□□□□ -0.23
Rfx3P48381 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.59□□□□□ -0.23
Rfx3P48381 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rfx3P48381 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rfx3P48381 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC13.59□□□□□ -0.23
Rfx3P48381 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Rfx3P48381 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rfx3P48381 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rfx3P48381 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rfx3P48381 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rfx3P48381 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rfx3P48381 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rfx3P48381 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rfx3P48381 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rfx3P48381 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rfx3P48381 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Rfx3P48381 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rfx3P48381 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rfx3P48381 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Rfx3P48381 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.58□□□□□ -0.24
Rfx3P48381 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.58□□□□□ -0.24
Rfx3P48381 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rfx3P48381 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Rfx3P48381 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC13.58□□□□□ -0.24
Rfx3P48381 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rfx3P48381 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rfx3P48381 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.58□□□□□ -0.24
Rfx3P48381 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.58□□□□□ -0.24
Rfx3P48381 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms