Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
TgfaP48030 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
TgfaP48030 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TgfaP48030 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TgfaP48030 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TgfaP48030 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
TgfaP48030 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TgfaP48030 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TgfaP48030 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TgfaP48030 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TgfaP48030 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TgfaP48030 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
TgfaP48030 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TgfaP48030 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
TgfaP48030 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
TgfaP48030 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TgfaP48030 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TgfaP48030 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
TgfaP48030 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
TgfaP48030 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TgfaP48030 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TgfaP48030 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TgfaP48030 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TgfaP48030 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TgfaP48030 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
TgfaP48030 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.02□□□□□ -0.33
TgfaP48030 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TgfaP48030 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.02□□□□□ -0.33
TgfaP48030 Gm43433-201ENSMUST00000196573 481 ntBASIC13.02□□□□□ -0.33
TgfaP48030 Gm7775-201ENSMUST00000218871 853 ntBASIC13.02□□□□□ -0.33
TgfaP48030 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.02□□□□□ -0.33
TgfaP48030 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.02□□□□□ -0.33
TgfaP48030 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
TgfaP48030 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
TgfaP48030 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.02□□□□□ -0.33
TgfaP48030 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TgfaP48030 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TgfaP48030 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TgfaP48030 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TgfaP48030 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TgfaP48030 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TgfaP48030 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TgfaP48030 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TgfaP48030 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
TgfaP48030 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.01□□□□□ -0.33
TgfaP48030 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TgfaP48030 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TgfaP48030 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.01□□□□□ -0.33
TgfaP48030 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TgfaP48030 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TgfaP48030 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TgfaP48030 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TgfaP48030 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TgfaP48030 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TgfaP48030 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TgfaP48030 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
TgfaP48030 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TgfaP48030 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
TgfaP48030 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
TgfaP48030 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
TgfaP48030 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TgfaP48030 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TgfaP48030 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.01□□□□□ -0.33
TgfaP48030 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
TgfaP48030 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.01□□□□□ -0.33
TgfaP48030 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.01□□□□□ -0.33
TgfaP48030 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TgfaP48030 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.01□□□□□ -0.33
TgfaP48030 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TgfaP48030 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TgfaP48030 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TgfaP48030 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TgfaP48030 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TgfaP48030 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TgfaP48030 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TgfaP48030 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TgfaP48030 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.01□□□□□ -0.33
TgfaP48030 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.01□□□□□ -0.33
TgfaP48030 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TgfaP48030 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TgfaP48030 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TgfaP48030 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TgfaP48030 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TgfaP48030 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TgfaP48030 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TgfaP48030 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13□□□□□ -0.33
TgfaP48030 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TgfaP48030 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TgfaP48030 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13□□□□□ -0.33
TgfaP48030 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
TgfaP48030 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13□□□□□ -0.33
TgfaP48030 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13□□□□□ -0.33
TgfaP48030 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13□□□□□ -0.33
TgfaP48030 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TgfaP48030 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13□□□□□ -0.33
TgfaP48030 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TgfaP48030 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
TgfaP48030 Gm4204-201ENSMUST00000110798 1231 ntBASIC13□□□□□ -0.33
TgfaP48030 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13□□□□□ -0.33
TgfaP48030 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms