Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC9.8□□□□□ -0.84
Xcl1P47993 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Xcl1P47993 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Xcl1P47993 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Xcl1P47993 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Xcl1P47993 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Xcl1P47993 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Xcl1P47993 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Xcl1P47993 Gm38318-201ENSMUST00000195769 1706 ntBASIC9.8□□□□□ -0.84
Xcl1P47993 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Xcl1P47993 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Xcl1P47993 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Xcl1P47993 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Xcl1P47993 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Xcl1P47993 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
Xcl1P47993 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Xcl1P47993 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC9.8□□□□□ -0.84
Xcl1P47993 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC9.8□□□□□ -0.84
Xcl1P47993 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC9.8□□□□□ -0.84
Xcl1P47993 Gm36967-201ENSMUST00000193814 266 ntBASIC9.8□□□□□ -0.84
Xcl1P47993 Gm6420-201ENSMUST00000193885 723 ntBASIC9.8□□□□□ -0.84
Xcl1P47993 Gm43173-201ENSMUST00000202246 593 ntBASIC9.8□□□□□ -0.84
Xcl1P47993 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Xcl1P47993 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Xcl1P47993 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Xcl1P47993 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Xcl1P47993 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Xcl1P47993 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Xcl1P47993 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Xcl1P47993 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Xcl1P47993 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC9.8□□□□□ -0.84
Xcl1P47993 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Xcl1P47993 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC9.8□□□□□ -0.84
Xcl1P47993 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC9.8□□□□□ -0.84
Xcl1P47993 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC9.8□□□□□ -0.84
Xcl1P47993 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Xcl1P47993 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Xcl1P47993 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Xcl1P47993 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Xcl1P47993 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Xcl1P47993 Gm13509-201ENSMUST00000119733 1308 ntBASIC9.8□□□□□ -0.84
Xcl1P47993 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Xcl1P47993 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Xcl1P47993 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC9.8□□□□□ -0.84
Xcl1P47993 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Xcl1P47993 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Xcl1P47993 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Xcl1P47993 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC9.8□□□□□ -0.84
Xcl1P47993 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Xcl1P47993 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC9.79□□□□□ -0.84
Xcl1P47993 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Xcl1P47993 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Xcl1P47993 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC9.79□□□□□ -0.84
Xcl1P47993 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Xcl1P47993 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Xcl1P47993 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Xcl1P47993 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC9.79□□□□□ -0.84
Xcl1P47993 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Xcl1P47993 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Xcl1P47993 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Xcl1P47993 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Xcl1P47993 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Xcl1P47993 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Xcl1P47993 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Xcl1P47993 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Xcl1P47993 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC9.79□□□□□ -0.84
Xcl1P47993 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Xcl1P47993 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Xcl1P47993 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Xcl1P47993 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Xcl1P47993 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Xcl1P47993 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Xcl1P47993 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Xcl1P47993 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Xcl1P47993 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Xcl1P47993 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Xcl1P47993 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Xcl1P47993 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Xcl1P47993 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Xcl1P47993 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Xcl1P47993 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Xcl1P47993 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Xcl1P47993 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Xcl1P47993 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Xcl1P47993 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Xcl1P47993 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Xcl1P47993 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Xcl1P47993 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Xcl1P47993 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Xcl1P47993 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC9.78□□□□□ -0.84
Xcl1P47993 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC9.78□□□□□ -0.84
Xcl1P47993 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Xcl1P47993 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Xcl1P47993 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Xcl1P47993 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Xcl1P47993 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Xcl1P47993 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC9.78□□□□□ -0.84
Xcl1P47993 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Xcl1P47993 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Xcl1P47993 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms