Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.42□□□□□ -0.1
Sox18P43680 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox18P43680 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox18P43680 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox18P43680 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.41□□□□□ -0.1
Sox18P43680 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox18P43680 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sox18P43680 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox18P43680 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox18P43680 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.41□□□□□ -0.1
Sox18P43680 Gm12859-201ENSMUST00000117834 427 ntBASIC14.41□□□□□ -0.1
Sox18P43680 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sox18P43680 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sox18P43680 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox18P43680 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.41□□□□□ -0.1
Sox18P43680 Gm28630-201ENSMUST00000187806 498 ntBASIC14.41□□□□□ -0.1
Sox18P43680 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.41□□□□□ -0.1
Sox18P43680 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.41□□□□□ -0.1
Sox18P43680 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.41□□□□□ -0.1
Sox18P43680 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Sox18P43680 Gm18062-201ENSMUST00000208020 547 ntBASIC14.41□□□□□ -0.1
Sox18P43680 Gm18055-201ENSMUST00000208254 547 ntBASIC14.41□□□□□ -0.1
Sox18P43680 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.41□□□□□ -0.1
Sox18P43680 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox18P43680 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox18P43680 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Sox18P43680 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Sox18P43680 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sox18P43680 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Sox18P43680 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Sox18P43680 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.41□□□□□ -0.1
Sox18P43680 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Sox18P43680 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox18P43680 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox18P43680 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox18P43680 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox18P43680 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox18P43680 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sox18P43680 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox18P43680 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox18P43680 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox18P43680 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox18P43680 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox18P43680 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox18P43680 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sox18P43680 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.41□□□□□ -0.1
Sox18P43680 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox18P43680 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sox18P43680 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox18P43680 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox18P43680 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.4□□□□□ -0.1
Sox18P43680 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox18P43680 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.4□□□□□ -0.1
Sox18P43680 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sox18P43680 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Sox18P43680 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox18P43680 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox18P43680 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sox18P43680 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox18P43680 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Sox18P43680 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Sox18P43680 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sox18P43680 Gm11478-201ENSMUST00000117851 599 ntBASIC14.4□□□□□ -0.1
Sox18P43680 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC14.4□□□□□ -0.1
Sox18P43680 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sox18P43680 Gm27680-201ENSMUST00000184192 160 ntBASIC14.4□□□□□ -0.1
Sox18P43680 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sox18P43680 Gm6745-201ENSMUST00000199216 526 ntBASIC14.4□□□□□ -0.1
Sox18P43680 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Sox18P43680 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Sox18P43680 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox18P43680 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Sox18P43680 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sox18P43680 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox18P43680 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.4□□□□□ -0.1
Sox18P43680 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.4□□□□□ -0.1
Sox18P43680 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox18P43680 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Sox18P43680 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox18P43680 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox18P43680 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.4□□□□□ -0.1
Sox18P43680 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Sox18P43680 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Sox18P43680 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox18P43680 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox18P43680 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox18P43680 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sox18P43680 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sox18P43680 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox18P43680 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.39□□□□□ -0.11
Sox18P43680 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.39□□□□□ -0.11
Sox18P43680 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox18P43680 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox18P43680 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.39□□□□□ -0.11
Sox18P43680 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.39□□□□□ -0.11
Sox18P43680 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox18P43680 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Sox18P43680 Gm29541-201ENSMUST00000191351 678 ntBASIC14.39□□□□□ -0.11
Sox18P43680 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sox18P43680 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms