Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Timp3P39876 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Timp3P39876 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Timp3P39876 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Timp3P39876 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Timp3P39876 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Timp3P39876 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Timp3P39876 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Timp3P39876 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Timp3P39876 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Timp3P39876 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Timp3P39876 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Timp3P39876 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Timp3P39876 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Timp3P39876 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Timp3P39876 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Timp3P39876 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Timp3P39876 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.35□□□□□ -0.43
Timp3P39876 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Timp3P39876 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Timp3P39876 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Timp3P39876 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Timp3P39876 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Timp3P39876 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Timp3P39876 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Timp3P39876 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Timp3P39876 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Timp3P39876 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.35□□□□□ -0.43
Timp3P39876 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Timp3P39876 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC12.35□□□□□ -0.43
Timp3P39876 Gm43575-201ENSMUST00000196420 516 ntBASIC12.35□□□□□ -0.43
Timp3P39876 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Timp3P39876 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Timp3P39876 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Timp3P39876 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Timp3P39876 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Timp3P39876 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Timp3P39876 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Timp3P39876 Gm10175-201ENSMUST00000086013 645 ntBASIC12.35□□□□□ -0.43
Timp3P39876 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.35□□□□□ -0.43
Timp3P39876 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Timp3P39876 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Timp3P39876 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC12.35□□□□□ -0.43
Timp3P39876 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Timp3P39876 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Timp3P39876 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Timp3P39876 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Timp3P39876 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Timp3P39876 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Timp3P39876 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.35□□□□□ -0.43
Timp3P39876 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Timp3P39876 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Timp3P39876 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Timp3P39876 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Timp3P39876 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Timp3P39876 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Timp3P39876 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.34□□□□□ -0.43
Timp3P39876 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.34□□□□□ -0.43
Timp3P39876 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Timp3P39876 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Timp3P39876 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Timp3P39876 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Timp3P39876 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Timp3P39876 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Timp3P39876 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Timp3P39876 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Timp3P39876 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Timp3P39876 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Timp3P39876 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Timp3P39876 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Timp3P39876 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Timp3P39876 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Timp3P39876 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Timp3P39876 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Timp3P39876 Gm27300-201ENSMUST00000184085 97 ntBASIC12.34□□□□□ -0.43
Timp3P39876 Gm27335-201ENSMUST00000184758 97 ntBASIC12.34□□□□□ -0.43
Timp3P39876 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Timp3P39876 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Timp3P39876 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Timp3P39876 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Timp3P39876 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC12.34□□□□□ -0.43
Timp3P39876 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Timp3P39876 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Timp3P39876 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Timp3P39876 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Timp3P39876 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Timp3P39876 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Timp3P39876 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC12.34□□□□□ -0.43
Timp3P39876 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Timp3P39876 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Timp3P39876 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Timp3P39876 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Timp3P39876 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Timp3P39876 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Timp3P39876 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Timp3P39876 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Timp3P39876 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Timp3P39876 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Timp3P39876 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Timp3P39876 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms