Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LdlrP35951 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
LdlrP35951 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LdlrP35951 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LdlrP35951 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LdlrP35951 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
LdlrP35951 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
LdlrP35951 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LdlrP35951 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LdlrP35951 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LdlrP35951 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
LdlrP35951 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LdlrP35951 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.97□□□□□ -0.01
LdlrP35951 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LdlrP35951 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LdlrP35951 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
LdlrP35951 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LdlrP35951 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LdlrP35951 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LdlrP35951 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LdlrP35951 Gm27867-201ENSMUST00000184778 125 ntBASIC14.97□□□□□ -0.01
LdlrP35951 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
LdlrP35951 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.97□□□□□ -0.01
LdlrP35951 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.97□□□□□ -0.01
LdlrP35951 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
LdlrP35951 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LdlrP35951 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.97□□□□□ -0.01
LdlrP35951 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.97□□□□□ -0.01
LdlrP35951 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LdlrP35951 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LdlrP35951 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LdlrP35951 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LdlrP35951 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.97□□□□□ -0.01
LdlrP35951 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LdlrP35951 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
LdlrP35951 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
LdlrP35951 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
LdlrP35951 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LdlrP35951 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LdlrP35951 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LdlrP35951 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
LdlrP35951 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
LdlrP35951 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
LdlrP35951 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LdlrP35951 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LdlrP35951 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LdlrP35951 Gm11594-201ENSMUST00000122313 162 ntBASIC14.96□□□□□ -0.01
LdlrP35951 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LdlrP35951 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.96□□□□□ -0.01
LdlrP35951 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.96□□□□□ -0.01
LdlrP35951 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.96□□□□□ -0.01
LdlrP35951 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LdlrP35951 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.96□□□□□ -0.01
LdlrP35951 Gm2213-201ENSMUST00000197485 688 ntBASIC14.96□□□□□ -0.01
LdlrP35951 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.96□□□□□ -0.01
LdlrP35951 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LdlrP35951 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
LdlrP35951 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LdlrP35951 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LdlrP35951 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LdlrP35951 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LdlrP35951 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LdlrP35951 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
LdlrP35951 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.96□□□□□ -0.01
LdlrP35951 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
LdlrP35951 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LdlrP35951 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
LdlrP35951 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LdlrP35951 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.96□□□□□ -0.02
LdlrP35951 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
LdlrP35951 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
LdlrP35951 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LdlrP35951 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
LdlrP35951 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
LdlrP35951 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LdlrP35951 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LdlrP35951 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LdlrP35951 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LdlrP35951 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LdlrP35951 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LdlrP35951 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LdlrP35951 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
LdlrP35951 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LdlrP35951 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.95□□□□□ -0.02
LdlrP35951 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LdlrP35951 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
LdlrP35951 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.95□□□□□ -0.02
LdlrP35951 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LdlrP35951 Mir5126-201ENSMUST00000175513 77 ntBASIC14.95□□□□□ -0.02
LdlrP35951 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.95□□□□□ -0.02
LdlrP35951 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.95□□□□□ -0.02
LdlrP35951 Gm5364-201ENSMUST00000216789 889 ntBASIC14.95□□□□□ -0.02
LdlrP35951 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.95□□□□□ -0.02
LdlrP35951 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LdlrP35951 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LdlrP35951 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LdlrP35951 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
LdlrP35951 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
LdlrP35951 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
LdlrP35951 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms