Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Slc6a11P31650 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Slc6a11P31650 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.29□□□□□ -0.12
Slc6a11P31650 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.29□□□□□ -0.12
Slc6a11P31650 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc6a11P31650 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc6a11P31650 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Slc6a11P31650 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc6a11P31650 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc6a11P31650 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Slc6a11P31650 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc6a11P31650 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.29□□□□□ -0.12
Slc6a11P31650 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Slc6a11P31650 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc6a11P31650 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc6a11P31650 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc6a11P31650 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
Slc6a11P31650 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc6a11P31650 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Slc6a11P31650 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc6a11P31650 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Slc6a11P31650 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc6a11P31650 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc6a11P31650 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Slc6a11P31650 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Slc6a11P31650 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc6a11P31650 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Slc6a11P31650 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.28□□□□□ -0.12
Slc6a11P31650 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Slc6a11P31650 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.28□□□□□ -0.12
Slc6a11P31650 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Slc6a11P31650 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc6a11P31650 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc6a11P31650 Gm43575-201ENSMUST00000196420 516 ntBASIC14.28□□□□□ -0.12
Slc6a11P31650 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc6a11P31650 Gm9172-201ENSMUST00000212092 954 ntBASIC14.28□□□□□ -0.12
Slc6a11P31650 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.28□□□□□ -0.12
Slc6a11P31650 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.28□□□□□ -0.12
Slc6a11P31650 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc6a11P31650 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc6a11P31650 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc6a11P31650 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc6a11P31650 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc6a11P31650 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Slc6a11P31650 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.28□□□□□ -0.12
Slc6a11P31650 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Slc6a11P31650 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc6a11P31650 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc6a11P31650 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.28□□□□□ -0.12
Slc6a11P31650 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc6a11P31650 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc6a11P31650 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Slc6a11P31650 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc6a11P31650 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc6a11P31650 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Slc6a11P31650 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Slc6a11P31650 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.27□□□□□ -0.12
Slc6a11P31650 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Slc6a11P31650 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.27□□□□□ -0.12
Slc6a11P31650 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.27□□□□□ -0.12
Slc6a11P31650 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.27□□□□□ -0.12
Slc6a11P31650 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Slc6a11P31650 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Slc6a11P31650 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Slc6a11P31650 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Slc6a11P31650 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Slc6a11P31650 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Slc6a11P31650 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Slc6a11P31650 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Slc6a11P31650 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Slc6a11P31650 Gm7063-201ENSMUST00000186840 981 ntBASIC14.27□□□□□ -0.13
Slc6a11P31650 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.27□□□□□ -0.13
Slc6a11P31650 Psmb5-202ENSMUST00000227257 622 ntBASIC14.27□□□□□ -0.13
Slc6a11P31650 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Slc6a11P31650 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Slc6a11P31650 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Slc6a11P31650 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.27□□□□□ -0.13
Slc6a11P31650 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Slc6a11P31650 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.27□□□□□ -0.13
Slc6a11P31650 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Slc6a11P31650 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Slc6a11P31650 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Slc6a11P31650 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Slc6a11P31650 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Slc6a11P31650 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Slc6a11P31650 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.27□□□□□ -0.13
Slc6a11P31650 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Slc6a11P31650 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Slc6a11P31650 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a11P31650 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a11P31650 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.26□□□□□ -0.13
Slc6a11P31650 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a11P31650 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a11P31650 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a11P31650 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Slc6a11P31650 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Slc6a11P31650 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Slc6a11P31650 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a11P31650 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a11P31650 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms