Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Nedd8P29595 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.95□□□□□ -0.18
Nedd8P29595 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nedd8P29595 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.95□□□□□ -0.18
Nedd8P29595 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nedd8P29595 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nedd8P29595 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Nedd8P29595 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.95□□□□□ -0.18
Nedd8P29595 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nedd8P29595 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nedd8P29595 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nedd8P29595 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nedd8P29595 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC13.95□□□□□ -0.18
Nedd8P29595 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC13.95□□□□□ -0.18
Nedd8P29595 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC13.95□□□□□ -0.18
Nedd8P29595 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC13.95□□□□□ -0.18
Nedd8P29595 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nedd8P29595 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Nedd8P29595 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.95□□□□□ -0.18
Nedd8P29595 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nedd8P29595 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nedd8P29595 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nedd8P29595 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.95□□□□□ -0.18
Nedd8P29595 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nedd8P29595 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Nedd8P29595 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nedd8P29595 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nedd8P29595 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nedd8P29595 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nedd8P29595 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Nedd8P29595 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nedd8P29595 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC13.94□□□□□ -0.18
Nedd8P29595 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.94□□□□□ -0.18
Nedd8P29595 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC13.94□□□□□ -0.18
Nedd8P29595 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC13.94□□□□□ -0.18
Nedd8P29595 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nedd8P29595 Gm16042-201ENSMUST00000204813 1247 ntBASIC13.94□□□□□ -0.18
Nedd8P29595 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nedd8P29595 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nedd8P29595 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nedd8P29595 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nedd8P29595 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nedd8P29595 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.94□□□□□ -0.18
Nedd8P29595 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nedd8P29595 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nedd8P29595 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nedd8P29595 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nedd8P29595 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nedd8P29595 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nedd8P29595 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nedd8P29595 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Nedd8P29595 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nedd8P29595 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.93□□□□□ -0.18
Nedd8P29595 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Nedd8P29595 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nedd8P29595 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nedd8P29595 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nedd8P29595 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nedd8P29595 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nedd8P29595 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nedd8P29595 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Nedd8P29595 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nedd8P29595 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nedd8P29595 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nedd8P29595 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Nedd8P29595 Timm23-208ENSMUST00000226683 750 ntBASIC13.93□□□□□ -0.18
Nedd8P29595 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Nedd8P29595 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Nedd8P29595 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
Nedd8P29595 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nedd8P29595 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nedd8P29595 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nedd8P29595 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nedd8P29595 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.93□□□□□ -0.18
Nedd8P29595 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nedd8P29595 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Nedd8P29595 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nedd8P29595 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Nedd8P29595 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.92□□□□□ -0.18
Nedd8P29595 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nedd8P29595 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nedd8P29595 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nedd8P29595 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Nedd8P29595 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.92□□□□□ -0.18
Nedd8P29595 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nedd8P29595 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nedd8P29595 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nedd8P29595 Gm12008-201ENSMUST00000117791 755 ntBASIC13.92□□□□□ -0.18
Nedd8P29595 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC13.92□□□□□ -0.18
Nedd8P29595 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nedd8P29595 Gm4217-201ENSMUST00000182243 1002 ntBASIC13.92□□□□□ -0.18
Nedd8P29595 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC13.92□□□□□ -0.18
Nedd8P29595 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nedd8P29595 Otx2os1-204ENSMUST00000227221 751 ntBASIC13.92□□□□□ -0.18
Nedd8P29595 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nedd8P29595 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nedd8P29595 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.92□□□□□ -0.18
Nedd8P29595 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nedd8P29595 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Nedd8P29595 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms