Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RxrbP28704 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RxrbP28704 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
RxrbP28704 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RxrbP28704 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RxrbP28704 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC15.12■□□□□ 0.01
RxrbP28704 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RxrbP28704 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RxrbP28704 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RxrbP28704 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RxrbP28704 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
RxrbP28704 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
RxrbP28704 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.12■□□□□ 0.01
RxrbP28704 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
RxrbP28704 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RxrbP28704 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RxrbP28704 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RxrbP28704 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RxrbP28704 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
RxrbP28704 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RxrbP28704 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RxrbP28704 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RxrbP28704 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RxrbP28704 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RxrbP28704 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RxrbP28704 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RxrbP28704 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RxrbP28704 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RxrbP28704 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RxrbP28704 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RxrbP28704 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RxrbP28704 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RxrbP28704 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
RxrbP28704 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RxrbP28704 Gm44454-201ENSMUST00000198541 138 ntBASIC15.11■□□□□ 0.01
RxrbP28704 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.11■□□□□ 0.01
RxrbP28704 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RxrbP28704 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.11■□□□□ 0.01
RxrbP28704 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC15.11■□□□□ 0.01
RxrbP28704 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RxrbP28704 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RxrbP28704 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RxrbP28704 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RxrbP28704 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RxrbP28704 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
RxrbP28704 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RxrbP28704 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RxrbP28704 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RxrbP28704 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RxrbP28704 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RxrbP28704 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RxrbP28704 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RxrbP28704 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RxrbP28704 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RxrbP28704 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RxrbP28704 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RxrbP28704 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RxrbP28704 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RxrbP28704 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RxrbP28704 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.1■□□□□ 0.01
RxrbP28704 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RxrbP28704 Mir3081-201ENSMUST00000175305 84 ntBASIC15.1■□□□□ 0.01
RxrbP28704 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RxrbP28704 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.1■□□□□ 0.01
RxrbP28704 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.1■□□□□ 0.01
RxrbP28704 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RxrbP28704 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RxrbP28704 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RxrbP28704 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RxrbP28704 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RxrbP28704 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RxrbP28704 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
RxrbP28704 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RxrbP28704 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
RxrbP28704 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RxrbP28704 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RxrbP28704 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RxrbP28704 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RxrbP28704 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RxrbP28704 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RxrbP28704 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
RxrbP28704 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RxrbP28704 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RxrbP28704 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RxrbP28704 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RxrbP28704 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
RxrbP28704 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RxrbP28704 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.09■□□□□ 0.01
RxrbP28704 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RxrbP28704 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RxrbP28704 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RxrbP28704 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RxrbP28704 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RxrbP28704 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.09■□□□□ 0.01
RxrbP28704 Gm27742-201ENSMUST00000184667 60 ntBASIC15.09■□□□□ 0.01
RxrbP28704 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RxrbP28704 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RxrbP28704 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RxrbP28704 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RxrbP28704 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms