Protein–RNA interactions for Protein: P27048

Snrpb, Small nuclear ribonucleoprotein-associated protein B, mousemouse

Known RBP Predictions only

Length 231 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SnrpbP27048 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
SnrpbP27048 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
SnrpbP27048 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.27□□□□□ -0.28
SnrpbP27048 Gm13559-201ENSMUST00000120476 863 ntBASIC13.27□□□□□ -0.29
SnrpbP27048 Gm21559-201ENSMUST00000220638 855 ntBASIC13.27□□□□□ -0.29
SnrpbP27048 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.27□□□□□ -0.29
SnrpbP27048 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SnrpbP27048 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SnrpbP27048 Gm8587-201ENSMUST00000076538 843 ntBASIC13.27□□□□□ -0.29
SnrpbP27048 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SnrpbP27048 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
SnrpbP27048 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SnrpbP27048 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SnrpbP27048 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
SnrpbP27048 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SnrpbP27048 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SnrpbP27048 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SnrpbP27048 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SnrpbP27048 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
SnrpbP27048 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
SnrpbP27048 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
SnrpbP27048 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SnrpbP27048 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SnrpbP27048 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SnrpbP27048 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
SnrpbP27048 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
SnrpbP27048 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SnrpbP27048 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SnrpbP27048 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SnrpbP27048 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
SnrpbP27048 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SnrpbP27048 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SnrpbP27048 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SnrpbP27048 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.26□□□□□ -0.29
SnrpbP27048 Gm20472-201ENSMUST00000174403 1240 ntBASIC13.26□□□□□ -0.29
SnrpbP27048 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SnrpbP27048 Carlr-201ENSMUST00000181515 2574 ntBASIC13.26□□□□□ -0.29
SnrpbP27048 Gm45058-201ENSMUST00000205810 766 ntBASIC13.26□□□□□ -0.29
SnrpbP27048 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SnrpbP27048 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SnrpbP27048 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SnrpbP27048 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.26□□□□□ -0.29
SnrpbP27048 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SnrpbP27048 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SnrpbP27048 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SnrpbP27048 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
SnrpbP27048 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SnrpbP27048 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SnrpbP27048 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SnrpbP27048 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SnrpbP27048 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SnrpbP27048 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SnrpbP27048 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SnrpbP27048 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
SnrpbP27048 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
SnrpbP27048 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SnrpbP27048 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SnrpbP27048 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SnrpbP27048 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SnrpbP27048 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SnrpbP27048 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SnrpbP27048 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
SnrpbP27048 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SnrpbP27048 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
SnrpbP27048 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SnrpbP27048 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SnrpbP27048 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SnrpbP27048 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SnrpbP27048 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SnrpbP27048 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SnrpbP27048 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SnrpbP27048 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.25□□□□□ -0.29
SnrpbP27048 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SnrpbP27048 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SnrpbP27048 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SnrpbP27048 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
SnrpbP27048 Gm11860-201ENSMUST00000122346 1010 ntBASIC13.25□□□□□ -0.29
SnrpbP27048 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SnrpbP27048 Gm9484-201ENSMUST00000195892 1159 ntBASIC13.25□□□□□ -0.29
SnrpbP27048 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC13.25□□□□□ -0.29
SnrpbP27048 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC13.25□□□□□ -0.29
SnrpbP27048 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC13.25□□□□□ -0.29
SnrpbP27048 Gm10812-201ENSMUST00000099864 546 ntBASIC13.25□□□□□ -0.29
SnrpbP27048 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
SnrpbP27048 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SnrpbP27048 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SnrpbP27048 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
SnrpbP27048 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.25□□□□□ -0.29
SnrpbP27048 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SnrpbP27048 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SnrpbP27048 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SnrpbP27048 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.25□□□□□ -0.29
SnrpbP27048 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SnrpbP27048 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SnrpbP27048 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SnrpbP27048 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
SnrpbP27048 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.24□□□□□ -0.29
SnrpbP27048 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SnrpbP27048 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SnrpbP27048 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms