Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Irf8P23611 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Irf8P23611 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Irf8P23611 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Irf8P23611 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Irf8P23611 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Irf8P23611 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Irf8P23611 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Irf8P23611 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Irf8P23611 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Irf8P23611 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Irf8P23611 AC131743.5-201ENSMUST00000220775 1618 ntBASIC16.2■□□□□ 0.18
Irf8P23611 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Irf8P23611 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Irf8P23611 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Irf8P23611 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC16.2■□□□□ 0.18
Irf8P23611 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Irf8P23611 Gm14494-201ENSMUST00000118786 435 ntBASIC16.2■□□□□ 0.18
Irf8P23611 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.2■□□□□ 0.18
Irf8P23611 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16.2■□□□□ 0.18
Irf8P23611 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Irf8P23611 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Irf8P23611 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Irf8P23611 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Irf8P23611 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Irf8P23611 Gm8096-201ENSMUST00000209921 1591 ntBASIC16.2■□□□□ 0.18
Irf8P23611 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Irf8P23611 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.2■□□□□ 0.18
Irf8P23611 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Irf8P23611 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Irf8P23611 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Irf8P23611 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Irf8P23611 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Irf8P23611 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Irf8P23611 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.19■□□□□ 0.18
Irf8P23611 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Irf8P23611 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Irf8P23611 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Irf8P23611 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Irf8P23611 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Irf8P23611 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Irf8P23611 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Irf8P23611 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Irf8P23611 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Irf8P23611 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Irf8P23611 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Irf8P23611 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Irf8P23611 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Irf8P23611 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Irf8P23611 Gm8000-201ENSMUST00000188378 592 ntBASIC16.19■□□□□ 0.18
Irf8P23611 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC16.19■□□□□ 0.18
Irf8P23611 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.19■□□□□ 0.18
Irf8P23611 Gm44492-201ENSMUST00000197012 141 ntBASIC16.19■□□□□ 0.18
Irf8P23611 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Irf8P23611 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Irf8P23611 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Irf8P23611 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.19■□□□□ 0.18
Irf8P23611 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Irf8P23611 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Irf8P23611 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Irf8P23611 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Irf8P23611 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Irf8P23611 Gm13410-201ENSMUST00000117058 1415 ntBASIC16.19■□□□□ 0.18
Irf8P23611 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC16.19■□□□□ 0.18
Irf8P23611 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Irf8P23611 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
Irf8P23611 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Irf8P23611 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.19■□□□□ 0.18
Irf8P23611 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Irf8P23611 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC16.18■□□□□ 0.18
Irf8P23611 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC16.18■□□□□ 0.18
Irf8P23611 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Irf8P23611 Sybu-209ENSMUST00000228639 4113 ntBASIC16.18■□□□□ 0.18
Irf8P23611 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Irf8P23611 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Irf8P23611 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Irf8P23611 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Irf8P23611 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.18■□□□□ 0.18
Irf8P23611 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Irf8P23611 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Irf8P23611 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Irf8P23611 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.18■□□□□ 0.18
Irf8P23611 Gm5264-201ENSMUST00000190584 848 ntBASIC16.18■□□□□ 0.18
Irf8P23611 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Irf8P23611 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Irf8P23611 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Irf8P23611 Gm10175-201ENSMUST00000086013 645 ntBASIC16.18■□□□□ 0.18
Irf8P23611 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Irf8P23611 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Irf8P23611 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Irf8P23611 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Irf8P23611 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.18■□□□□ 0.18
Irf8P23611 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.18■□□□□ 0.18
Irf8P23611 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Irf8P23611 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Irf8P23611 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Irf8P23611 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Irf8P23611 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Irf8P23611 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Irf8P23611 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms