Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 AV026068-213ENSMUST00000223675 1171 ntBASIC14.2□□□□□ -0.14
TP20293 Mzt1-203ENSMUST00000227948 952 ntBASIC14.2□□□□□ -0.14
TP20293 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TP20293 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TP20293 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TP20293 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TP20293 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TP20293 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
TP20293 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TP20293 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.2□□□□□ -0.14
TP20293 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TP20293 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TP20293 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TP20293 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
TP20293 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
TP20293 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TP20293 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.2□□□□□ -0.14
TP20293 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TP20293 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TP20293 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
TP20293 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TP20293 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TP20293 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TP20293 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TP20293 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TP20293 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TP20293 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TP20293 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TP20293 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TP20293 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TP20293 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.19□□□□□ -0.14
TP20293 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TP20293 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TP20293 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TP20293 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TP20293 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TP20293 Gm7461-201ENSMUST00000058918 827 ntBASIC14.19□□□□□ -0.14
TP20293 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TP20293 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.19□□□□□ -0.14
TP20293 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.19□□□□□ -0.14
TP20293 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TP20293 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
TP20293 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
TP20293 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TP20293 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TP20293 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TP20293 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TP20293 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TP20293 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TP20293 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
TP20293 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
TP20293 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.18□□□□□ -0.14
TP20293 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TP20293 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TP20293 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TP20293 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TP20293 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TP20293 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
TP20293 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TP20293 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TP20293 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TP20293 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TP20293 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TP20293 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TP20293 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TP20293 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.18□□□□□ -0.14
TP20293 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TP20293 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TP20293 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
TP20293 Gm18489-201ENSMUST00000172565 551 ntBASIC14.18□□□□□ -0.14
TP20293 Gm5682-201ENSMUST00000173402 505 ntBASIC14.18□□□□□ -0.14
TP20293 Gm37153-201ENSMUST00000193637 231 ntBASIC14.18□□□□□ -0.14
TP20293 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.18□□□□□ -0.14
TP20293 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.18□□□□□ -0.14
TP20293 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TP20293 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TP20293 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TP20293 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
TP20293 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.18□□□□□ -0.14
TP20293 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.18□□□□□ -0.14
TP20293 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TP20293 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TP20293 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TP20293 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TP20293 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TP20293 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TP20293 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TP20293 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TP20293 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TP20293 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TP20293 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TP20293 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TP20293 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TP20293 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TP20293 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TP20293 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.17□□□□□ -0.14
TP20293 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TP20293 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.17□□□□□ -0.14
TP20293 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.17□□□□□ -0.14
TP20293 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms