Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Cdx1P18111 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdx1P18111 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdx1P18111 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdx1P18111 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cdx1P18111 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdx1P18111 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cdx1P18111 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.18□□□□□ -0.46
Cdx1P18111 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cdx1P18111 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cdx1P18111 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Cdx1P18111 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdx1P18111 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Cdx1P18111 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdx1P18111 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdx1P18111 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdx1P18111 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdx1P18111 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Cdx1P18111 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdx1P18111 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdx1P18111 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdx1P18111 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cdx1P18111 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdx1P18111 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdx1P18111 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdx1P18111 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.17□□□□□ -0.46
Cdx1P18111 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdx1P18111 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC12.17□□□□□ -0.46
Cdx1P18111 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Cdx1P18111 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdx1P18111 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.17□□□□□ -0.46
Cdx1P18111 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cdx1P18111 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC12.17□□□□□ -0.46
Cdx1P18111 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC12.17□□□□□ -0.46
Cdx1P18111 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC12.17□□□□□ -0.46
Cdx1P18111 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cdx1P18111 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdx1P18111 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdx1P18111 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdx1P18111 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdx1P18111 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdx1P18111 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdx1P18111 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdx1P18111 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdx1P18111 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cdx1P18111 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Cdx1P18111 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.17□□□□□ -0.46
Cdx1P18111 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdx1P18111 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdx1P18111 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdx1P18111 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdx1P18111 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdx1P18111 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.17□□□□□ -0.46
Cdx1P18111 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdx1P18111 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdx1P18111 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Cdx1P18111 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Cdx1P18111 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdx1P18111 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdx1P18111 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdx1P18111 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdx1P18111 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.16□□□□□ -0.46
Cdx1P18111 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdx1P18111 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdx1P18111 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Cdx1P18111 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.16□□□□□ -0.46
Cdx1P18111 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdx1P18111 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Cdx1P18111 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Cdx1P18111 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC12.16□□□□□ -0.46
Cdx1P18111 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdx1P18111 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdx1P18111 Gm7461-201ENSMUST00000058918 827 ntBASIC12.16□□□□□ -0.46
Cdx1P18111 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdx1P18111 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdx1P18111 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.16□□□□□ -0.46
Cdx1P18111 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdx1P18111 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdx1P18111 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdx1P18111 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdx1P18111 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdx1P18111 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Cdx1P18111 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.16□□□□□ -0.46
Cdx1P18111 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdx1P18111 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Cdx1P18111 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdx1P18111 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdx1P18111 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdx1P18111 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Cdx1P18111 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdx1P18111 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdx1P18111 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdx1P18111 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdx1P18111 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdx1P18111 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdx1P18111 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cdx1P18111 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cdx1P18111 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Cdx1P18111 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Cdx1P18111 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms