Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RaraP11416 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RaraP11416 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RaraP11416 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RaraP11416 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RaraP11416 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RaraP11416 Ap5m1-205ENSMUST00000227431 3757 ntBASIC16.29■□□□□ 0.2
RaraP11416 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RaraP11416 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RaraP11416 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RaraP11416 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RaraP11416 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RaraP11416 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RaraP11416 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RaraP11416 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.29■□□□□ 0.2
RaraP11416 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RaraP11416 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RaraP11416 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RaraP11416 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RaraP11416 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RaraP11416 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RaraP11416 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RaraP11416 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RaraP11416 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RaraP11416 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RaraP11416 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RaraP11416 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.28■□□□□ 0.2
RaraP11416 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RaraP11416 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RaraP11416 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RaraP11416 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RaraP11416 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.28■□□□□ 0.2
RaraP11416 Gm28033-201ENSMUST00000184224 96 ntBASIC16.28■□□□□ 0.2
RaraP11416 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.28■□□□□ 0.2
RaraP11416 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.28■□□□□ 0.2
RaraP11416 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.28■□□□□ 0.2
RaraP11416 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RaraP11416 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RaraP11416 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RaraP11416 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RaraP11416 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RaraP11416 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RaraP11416 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RaraP11416 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RaraP11416 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RaraP11416 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RaraP11416 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RaraP11416 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
RaraP11416 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RaraP11416 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RaraP11416 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RaraP11416 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RaraP11416 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RaraP11416 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RaraP11416 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
RaraP11416 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
RaraP11416 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
RaraP11416 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
RaraP11416 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RaraP11416 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RaraP11416 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC16.27■□□□□ 0.2
RaraP11416 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RaraP11416 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RaraP11416 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.27■□□□□ 0.2
RaraP11416 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
RaraP11416 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC16.27■□□□□ 0.19
RaraP11416 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
RaraP11416 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RaraP11416 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RaraP11416 Gm9856-201ENSMUST00000217077 2578 ntBASIC16.27■□□□□ 0.19
RaraP11416 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RaraP11416 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RaraP11416 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RaraP11416 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.26■□□□□ 0.19
RaraP11416 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
RaraP11416 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RaraP11416 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RaraP11416 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.26■□□□□ 0.19
RaraP11416 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RaraP11416 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RaraP11416 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RaraP11416 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RaraP11416 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RaraP11416 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RaraP11416 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RaraP11416 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RaraP11416 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RaraP11416 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
RaraP11416 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RaraP11416 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RaraP11416 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RaraP11416 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RaraP11416 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RaraP11416 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RaraP11416 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RaraP11416 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RaraP11416 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RaraP11416 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RaraP11416 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RaraP11416 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms