Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccl3P10855 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccl3P10855 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccl3P10855 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.24□□□□□ -0.29
Ccl3P10855 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccl3P10855 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.24□□□□□ -0.29
Ccl3P10855 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccl3P10855 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.23□□□□□ -0.29
Ccl3P10855 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.23□□□□□ -0.29
Ccl3P10855 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccl3P10855 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.23□□□□□ -0.29
Ccl3P10855 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.23□□□□□ -0.29
Ccl3P10855 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccl3P10855 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccl3P10855 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ccl3P10855 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccl3P10855 Gm24543-201ENSMUST00000103867 82 ntBASIC13.23□□□□□ -0.29
Ccl3P10855 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Ccl3P10855 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccl3P10855 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccl3P10855 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.23□□□□□ -0.29
Ccl3P10855 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Ccl3P10855 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccl3P10855 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.23□□□□□ -0.29
Ccl3P10855 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccl3P10855 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccl3P10855 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccl3P10855 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Ccl3P10855 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ccl3P10855 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.23□□□□□ -0.29
Ccl3P10855 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccl3P10855 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ccl3P10855 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.23□□□□□ -0.29
Ccl3P10855 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Ccl3P10855 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ccl3P10855 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.23□□□□□ -0.29
Ccl3P10855 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccl3P10855 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.22□□□□□ -0.29
Ccl3P10855 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccl3P10855 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccl3P10855 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccl3P10855 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccl3P10855 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccl3P10855 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccl3P10855 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccl3P10855 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccl3P10855 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccl3P10855 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ccl3P10855 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccl3P10855 Gm5566-201ENSMUST00000116118 459 ntBASIC13.22□□□□□ -0.29
Ccl3P10855 Gm5479-201ENSMUST00000160578 435 ntBASIC13.22□□□□□ -0.29
Ccl3P10855 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccl3P10855 Gm43438-201ENSMUST00000198133 379 ntBASIC13.22□□□□□ -0.29
Ccl3P10855 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccl3P10855 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccl3P10855 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.22□□□□□ -0.29
Ccl3P10855 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccl3P10855 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccl3P10855 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccl3P10855 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccl3P10855 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccl3P10855 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccl3P10855 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccl3P10855 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccl3P10855 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccl3P10855 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccl3P10855 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ccl3P10855 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccl3P10855 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccl3P10855 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccl3P10855 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.21□□□□□ -0.29
Ccl3P10855 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccl3P10855 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Ccl3P10855 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ccl3P10855 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.21□□□□□ -0.29
Ccl3P10855 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccl3P10855 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Ccl3P10855 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccl3P10855 Gm19439-201ENSMUST00000198195 2273 ntBASIC13.21□□□□□ -0.29
Ccl3P10855 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccl3P10855 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ccl3P10855 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ccl3P10855 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Ccl3P10855 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC13.21□□□□□ -0.3
Ccl3P10855 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.3
Ccl3P10855 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.21□□□□□ -0.3
Ccl3P10855 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl3P10855 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl3P10855 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.2□□□□□ -0.3
Ccl3P10855 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl3P10855 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl3P10855 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl3P10855 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl3P10855 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl3P10855 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl3P10855 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl3P10855 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl3P10855 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ccl3P10855 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl3P10855 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms