Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rc3h2P0C090 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rc3h2P0C090 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rc3h2P0C090 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rc3h2P0C090 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rc3h2P0C090 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.3■□□□□ 0.04
Rc3h2P0C090 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
Rc3h2P0C090 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.29■□□□□ 0.04
Rc3h2P0C090 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Rc3h2P0C090 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rc3h2P0C090 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rc3h2P0C090 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rc3h2P0C090 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rc3h2P0C090 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rc3h2P0C090 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.29■□□□□ 0.04
Rc3h2P0C090 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rc3h2P0C090 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rc3h2P0C090 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rc3h2P0C090 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.29■□□□□ 0.04
Rc3h2P0C090 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rc3h2P0C090 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.29■□□□□ 0.04
Rc3h2P0C090 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rc3h2P0C090 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rc3h2P0C090 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rc3h2P0C090 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rc3h2P0C090 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.29■□□□□ 0.04
Rc3h2P0C090 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Rc3h2P0C090 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.29■□□□□ 0.04
Rc3h2P0C090 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rc3h2P0C090 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rc3h2P0C090 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rc3h2P0C090 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rc3h2P0C090 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.28■□□□□ 0.04
Rc3h2P0C090 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rc3h2P0C090 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rc3h2P0C090 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Rc3h2P0C090 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rc3h2P0C090 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.28■□□□□ 0.04
Rc3h2P0C090 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.28■□□□□ 0.04
Rc3h2P0C090 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rc3h2P0C090 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Rc3h2P0C090 Gm25287-201ENSMUST00000103846 110 ntBASIC15.28■□□□□ 0.04
Rc3h2P0C090 Gm22918-201ENSMUST00000103855 110 ntBASIC15.28■□□□□ 0.04
Rc3h2P0C090 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Rc3h2P0C090 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rc3h2P0C090 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.28■□□□□ 0.04
Rc3h2P0C090 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rc3h2P0C090 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.28■□□□□ 0.04
Rc3h2P0C090 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rc3h2P0C090 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rc3h2P0C090 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.28■□□□□ 0.04
Rc3h2P0C090 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.28■□□□□ 0.04
Rc3h2P0C090 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rc3h2P0C090 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rc3h2P0C090 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rc3h2P0C090 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rc3h2P0C090 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rc3h2P0C090 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rc3h2P0C090 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rc3h2P0C090 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rc3h2P0C090 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rc3h2P0C090 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rc3h2P0C090 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Rc3h2P0C090 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.27■□□□□ 0.04
Rc3h2P0C090 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rc3h2P0C090 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rc3h2P0C090 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rc3h2P0C090 Gm11543-201ENSMUST00000120758 370 ntBASIC15.27■□□□□ 0.04
Rc3h2P0C090 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Rc3h2P0C090 Gm24158-201ENSMUST00000175263 71 ntBASIC15.27■□□□□ 0.04
Rc3h2P0C090 Gm10253-201ENSMUST00000194270 940 ntBASIC15.27■□□□□ 0.04
Rc3h2P0C090 Gm7774-201ENSMUST00000200064 533 ntBASIC15.27■□□□□ 0.04
Rc3h2P0C090 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC15.27■□□□□ 0.04
Rc3h2P0C090 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.27■□□□□ 0.04
Rc3h2P0C090 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Rc3h2P0C090 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rc3h2P0C090 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rc3h2P0C090 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Rc3h2P0C090 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rc3h2P0C090 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rc3h2P0C090 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rc3h2P0C090 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rc3h2P0C090 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.27■□□□□ 0.03
Rc3h2P0C090 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rc3h2P0C090 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rc3h2P0C090 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rc3h2P0C090 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rc3h2P0C090 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rc3h2P0C090 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rc3h2P0C090 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rc3h2P0C090 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rc3h2P0C090 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rc3h2P0C090 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rc3h2P0C090 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rc3h2P0C090 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rc3h2P0C090 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rc3h2P0C090 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rc3h2P0C090 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC15.26■□□□□ 0.03
Rc3h2P0C090 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Rc3h2P0C090 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms