Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Gm43703-201ENSMUST00000200523 763 ntBASIC19.4■□□□□ 0.7
Hoxc9P09633 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Hoxc9P09633 AC135669.1-201ENSMUST00000213585 412 ntBASIC19.4■□□□□ 0.7
Hoxc9P09633 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC19.4■□□□□ 0.7
Hoxc9P09633 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc9P09633 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc9P09633 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc9P09633 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc9P09633 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc9P09633 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc9P09633 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc9P09633 Gm6263-201ENSMUST00000120029 1342 ntBASIC19.4■□□□□ 0.7
Hoxc9P09633 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc9P09633 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC19.4■□□□□ 0.7
Hoxc9P09633 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc9P09633 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc9P09633 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Hoxc9P09633 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Hoxc9P09633 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxc9P09633 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxc9P09633 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxc9P09633 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxc9P09633 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxc9P09633 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Hoxc9P09633 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC19.39■□□□□ 0.69
Hoxc9P09633 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxc9P09633 Gm29667-201ENSMUST00000190817 490 ntBASIC19.39■□□□□ 0.69
Hoxc9P09633 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxc9P09633 Gm16476-201ENSMUST00000221544 139 ntBASIC19.39■□□□□ 0.69
Hoxc9P09633 Dupd1-202ENSMUST00000224735 548 ntBASIC19.39■□□□□ 0.69
Hoxc9P09633 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxc9P09633 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Hoxc9P09633 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC19.39■□□□□ 0.69
Hoxc9P09633 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxc9P09633 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxc9P09633 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Hoxc9P09633 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxc9P09633 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxc9P09633 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxc9P09633 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxc9P09633 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxc9P09633 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxc9P09633 Gm43195-201ENSMUST00000200614 2332 ntBASIC19.39■□□□□ 0.69
Hoxc9P09633 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxc9P09633 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxc9P09633 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxc9P09633 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.38■□□□□ 0.69
Hoxc9P09633 Gm4204-201ENSMUST00000110798 1231 ntBASIC19.38■□□□□ 0.69
Hoxc9P09633 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxc9P09633 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxc9P09633 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxc9P09633 Cd63-ps-201ENSMUST00000145417 875 ntBASIC19.38■□□□□ 0.69
Hoxc9P09633 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxc9P09633 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxc9P09633 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxc9P09633 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxc9P09633 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxc9P09633 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxc9P09633 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxc9P09633 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxc9P09633 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC19.38■□□□□ 0.69
Hoxc9P09633 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Hoxc9P09633 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxc9P09633 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxc9P09633 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxc9P09633 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxc9P09633 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxc9P09633 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Hoxc9P09633 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxc9P09633 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxc9P09633 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxc9P09633 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxc9P09633 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxc9P09633 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxc9P09633 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC19.36■□□□□ 0.69
Hoxc9P09633 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxc9P09633 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Hoxc9P09633 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxc9P09633 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC19.36■□□□□ 0.69
Hoxc9P09633 Trav13-3-201ENSMUST00000117226 336 ntBASIC19.36■□□□□ 0.69
Hoxc9P09633 Gm8749-201ENSMUST00000117737 331 ntBASIC19.36■□□□□ 0.69
Hoxc9P09633 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Hoxc9P09633 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC19.36■□□□□ 0.69
Hoxc9P09633 Gm27631-201ENSMUST00000184163 466 ntBASIC19.36■□□□□ 0.69
Hoxc9P09633 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxc9P09633 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxc9P09633 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxc9P09633 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxc9P09633 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxc9P09633 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxc9P09633 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxc9P09633 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxc9P09633 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxc9P09633 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxc9P09633 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxc9P09633 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxc9P09633 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxc9P09633 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hoxc9P09633 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Hoxc9P09633 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms