Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a2P08122 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a2P08122 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a2P08122 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.82□□□□□ -0.2
Col4a2P08122 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a2P08122 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.82□□□□□ -0.2
Col4a2P08122 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a2P08122 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Col4a2P08122 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Col4a2P08122 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a2P08122 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a2P08122 Gm12138-201ENSMUST00000122180 951 ntBASIC13.81□□□□□ -0.2
Col4a2P08122 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.81□□□□□ -0.2
Col4a2P08122 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a2P08122 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Col4a2P08122 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.81□□□□□ -0.2
Col4a2P08122 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.81□□□□□ -0.2
Col4a2P08122 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Col4a2P08122 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a2P08122 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.81□□□□□ -0.2
Col4a2P08122 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a2P08122 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a2P08122 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a2P08122 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a2P08122 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a2P08122 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a2P08122 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a2P08122 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a2P08122 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a2P08122 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a2P08122 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a2P08122 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a2P08122 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a2P08122 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a2P08122 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a2P08122 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a2P08122 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.81□□□□□ -0.2
Col4a2P08122 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a2P08122 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a2P08122 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a2P08122 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a2P08122 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Col4a2P08122 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Col4a2P08122 Gm42612-201ENSMUST00000197986 623 ntBASIC13.81□□□□□ -0.2
Col4a2P08122 Gm43170-201ENSMUST00000199827 612 ntBASIC13.81□□□□□ -0.2
Col4a2P08122 Gm16476-201ENSMUST00000221544 139 ntBASIC13.81□□□□□ -0.2
Col4a2P08122 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a2P08122 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Col4a2P08122 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a2P08122 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col4a2P08122 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col4a2P08122 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col4a2P08122 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col4a2P08122 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Col4a2P08122 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col4a2P08122 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col4a2P08122 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col4a2P08122 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.8□□□□□ -0.2
Col4a2P08122 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col4a2P08122 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col4a2P08122 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col4a2P08122 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col4a2P08122 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.8□□□□□ -0.2
Col4a2P08122 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col4a2P08122 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col4a2P08122 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.8□□□□□ -0.2
Col4a2P08122 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col4a2P08122 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col4a2P08122 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col4a2P08122 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.8□□□□□ -0.2
Col4a2P08122 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col4a2P08122 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Col4a2P08122 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Col4a2P08122 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col4a2P08122 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Col4a2P08122 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col4a2P08122 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col4a2P08122 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Col4a2P08122 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Col4a2P08122 Gm14928-201ENSMUST00000120198 477 ntBASIC13.79□□□□□ -0.2
Col4a2P08122 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.79□□□□□ -0.2
Col4a2P08122 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.79□□□□□ -0.2
Col4a2P08122 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.79□□□□□ -0.2
Col4a2P08122 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.79□□□□□ -0.2
Col4a2P08122 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col4a2P08122 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col4a2P08122 Gm28631-201ENSMUST00000190740 334 ntBASIC13.79□□□□□ -0.2
Col4a2P08122 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.79□□□□□ -0.2
Col4a2P08122 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.79□□□□□ -0.2
Col4a2P08122 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.79□□□□□ -0.2
Col4a2P08122 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.79□□□□□ -0.2
Col4a2P08122 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col4a2P08122 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Col4a2P08122 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col4a2P08122 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col4a2P08122 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col4a2P08122 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col4a2P08122 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col4a2P08122 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col4a2P08122 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms