Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TnfP06804 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TnfP06804 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TnfP06804 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TnfP06804 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TnfP06804 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15.92■□□□□ 0.14
TnfP06804 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TnfP06804 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
TnfP06804 Mir6956-201ENSMUST00000183598 62 ntBASIC15.92■□□□□ 0.14
TnfP06804 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC15.92■□□□□ 0.14
TnfP06804 Gm44872-201ENSMUST00000207864 420 ntBASIC15.92■□□□□ 0.14
TnfP06804 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC15.92■□□□□ 0.14
TnfP06804 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TnfP06804 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TnfP06804 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.92■□□□□ 0.14
TnfP06804 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TnfP06804 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TnfP06804 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TnfP06804 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TnfP06804 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TnfP06804 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TnfP06804 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TnfP06804 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TnfP06804 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TnfP06804 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TnfP06804 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TnfP06804 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.91■□□□□ 0.14
TnfP06804 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TnfP06804 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TnfP06804 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TnfP06804 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TnfP06804 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TnfP06804 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.91■□□□□ 0.14
TnfP06804 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TnfP06804 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TnfP06804 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
TnfP06804 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TnfP06804 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.91■□□□□ 0.14
TnfP06804 Mir449b-201ENSMUST00000104833 80 ntBASIC15.91■□□□□ 0.14
TnfP06804 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TnfP06804 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15.91■□□□□ 0.14
TnfP06804 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.91■□□□□ 0.14
TnfP06804 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TnfP06804 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TnfP06804 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC15.91■□□□□ 0.14
TnfP06804 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
TnfP06804 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TnfP06804 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TnfP06804 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TnfP06804 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
TnfP06804 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TnfP06804 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TnfP06804 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.91■□□□□ 0.14
TnfP06804 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TnfP06804 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TnfP06804 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
TnfP06804 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.91■□□□□ 0.14
TnfP06804 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TnfP06804 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TnfP06804 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TnfP06804 Fgf17-202ENSMUST00000227123 1336 ntBASIC15.91■□□□□ 0.14
TnfP06804 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TnfP06804 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TnfP06804 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TnfP06804 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TnfP06804 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
TnfP06804 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TnfP06804 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.9■□□□□ 0.14
TnfP06804 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TnfP06804 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TnfP06804 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TnfP06804 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TnfP06804 Gm22065-201ENSMUST00000103753 110 ntBASIC15.9■□□□□ 0.14
TnfP06804 Gm22066-201ENSMUST00000103761 110 ntBASIC15.9■□□□□ 0.14
TnfP06804 Gm24932-201ENSMUST00000103763 110 ntBASIC15.9■□□□□ 0.14
TnfP06804 Gm24115-201ENSMUST00000103799 110 ntBASIC15.9■□□□□ 0.14
TnfP06804 Gm22190-201ENSMUST00000103827 110 ntBASIC15.9■□□□□ 0.14
TnfP06804 Gm22191-201ENSMUST00000103831 110 ntBASIC15.9■□□□□ 0.14
TnfP06804 Gm24721-201ENSMUST00000103849 110 ntBASIC15.9■□□□□ 0.14
TnfP06804 Gm28018-201ENSMUST00000103869 110 ntBASIC15.9■□□□□ 0.14
TnfP06804 Gm26399-201ENSMUST00000103937 110 ntBASIC15.9■□□□□ 0.14
TnfP06804 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TnfP06804 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC15.9■□□□□ 0.14
TnfP06804 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TnfP06804 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC15.9■□□□□ 0.14
TnfP06804 Gm25948-201ENSMUST00000175334 112 ntBASIC15.9■□□□□ 0.14
TnfP06804 Gm25349-201ENSMUST00000177728 110 ntBASIC15.9■□□□□ 0.14
TnfP06804 Gm23616-201ENSMUST00000177797 110 ntBASIC15.9■□□□□ 0.14
TnfP06804 Gm25871-201ENSMUST00000177816 110 ntBASIC15.9■□□□□ 0.14
TnfP06804 Gm24752-201ENSMUST00000178240 110 ntBASIC15.9■□□□□ 0.14
TnfP06804 Gm24496-201ENSMUST00000178287 110 ntBASIC15.9■□□□□ 0.14
TnfP06804 Gm25649-201ENSMUST00000178476 110 ntBASIC15.9■□□□□ 0.14
TnfP06804 Gm25548-201ENSMUST00000178681 110 ntBASIC15.9■□□□□ 0.14
TnfP06804 Gm23147-201ENSMUST00000178841 110 ntBASIC15.9■□□□□ 0.14
TnfP06804 Gm26095-201ENSMUST00000179270 110 ntBASIC15.9■□□□□ 0.14
TnfP06804 Gm22171-201ENSMUST00000179283 110 ntBASIC15.9■□□□□ 0.14
TnfP06804 Gm23936-201ENSMUST00000179354 110 ntBASIC15.9■□□□□ 0.14
TnfP06804 Gm22619-201ENSMUST00000179516 110 ntBASIC15.9■□□□□ 0.14
TnfP06804 Gm25255-201ENSMUST00000179579 110 ntBASIC15.9■□□□□ 0.14
TnfP06804 Gm24755-201ENSMUST00000179691 110 ntBASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms