Protein–RNA interactions for Protein: P04214

T-cell receptor beta chain V region E1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04214 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
P04214 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
P04214 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
P04214 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
P04214 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
P04214 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
P04214 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
P04214 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC15.64■□□□□ 0.09
P04214 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
P04214 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
P04214 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
P04214 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.64■□□□□ 0.09
P04214 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
P04214 Gm18062-201ENSMUST00000208020 547 ntBASIC15.64■□□□□ 0.09
P04214 Gm18055-201ENSMUST00000208254 547 ntBASIC15.64■□□□□ 0.09
P04214 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC15.64■□□□□ 0.09
P04214 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
P04214 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
P04214 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
P04214 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
P04214 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC15.64■□□□□ 0.09
P04214 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
P04214 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
P04214 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
P04214 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
P04214 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
P04214 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
P04214 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
P04214 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
P04214 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
P04214 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
P04214 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
P04214 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.63■□□□□ 0.09
P04214 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
P04214 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.63■□□□□ 0.09
P04214 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
P04214 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
P04214 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
P04214 Gm13464-201ENSMUST00000119418 935 ntBASIC15.63■□□□□ 0.09
P04214 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
P04214 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
P04214 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
P04214 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
P04214 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
P04214 Gm9797-201ENSMUST00000052902 613 ntBASIC15.63■□□□□ 0.09
P04214 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
P04214 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
P04214 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
P04214 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
P04214 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC15.63■□□□□ 0.09
P04214 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
P04214 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.63■□□□□ 0.09
P04214 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
P04214 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
P04214 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
P04214 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
P04214 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
P04214 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC15.62■□□□□ 0.09
P04214 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC15.62■□□□□ 0.09
P04214 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
P04214 Gm28760-201ENSMUST00000185995 736 ntBASIC15.62■□□□□ 0.09
P04214 Gm31326-201ENSMUST00000191856 1048 ntBASIC15.62■□□□□ 0.09
P04214 Gm18624-201ENSMUST00000220966 658 ntBASIC15.62■□□□□ 0.09
P04214 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
P04214 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
P04214 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
P04214 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
P04214 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
P04214 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
P04214 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
P04214 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
P04214 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
P04214 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
P04214 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
P04214 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC15.61■□□□□ 0.09
P04214 Gm11918-201ENSMUST00000121660 179 ntBASIC15.61■□□□□ 0.09
P04214 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC15.61■□□□□ 0.09
P04214 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC15.61■□□□□ 0.09
P04214 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
P04214 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.61■□□□□ 0.09
P04214 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC15.61■□□□□ 0.09
P04214 Gm2451-201ENSMUST00000199447 999 ntBASIC15.61■□□□□ 0.09
P04214 Gm10290-201ENSMUST00000200451 999 ntBASIC15.61■□□□□ 0.09
P04214 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC15.61■□□□□ 0.09
P04214 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
P04214 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
P04214 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
P04214 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
P04214 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
P04214 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
P04214 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
P04214 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
P04214 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
P04214 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
P04214 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
P04214 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
P04214 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
P04214 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
P04214 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
P04214 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms