Protein–RNA interactions for Protein: P01728

Ig lambda-2 chain V region, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01728 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01728 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01728 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01728 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01728 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
P01728 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01728 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01728 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01728 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC11.8□□□□□ -0.52
P01728 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC11.8□□□□□ -0.52
P01728 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01728 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
P01728 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
P01728 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
P01728 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P01728 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
P01728 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P01728 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P01728 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.79□□□□□ -0.52
P01728 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P01728 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
P01728 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
P01728 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P01728 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
P01728 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC11.79□□□□□ -0.52
P01728 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC11.79□□□□□ -0.52
P01728 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
P01728 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
P01728 AC153794.1-201ENSMUST00000169148 126 ntBASIC11.79□□□□□ -0.52
P01728 Gm6623-201ENSMUST00000173570 544 ntBASIC11.79□□□□□ -0.52
P01728 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC11.79□□□□□ -0.52
P01728 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P01728 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
P01728 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P01728 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P01728 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
P01728 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC11.79□□□□□ -0.52
P01728 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P01728 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
P01728 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P01728 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
P01728 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P01728 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC11.79□□□□□ -0.52
P01728 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
P01728 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P01728 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
P01728 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P01728 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
P01728 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P01728 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
P01728 Matn2-206ENSMUST00000228570 2798 ntBASIC11.79□□□□□ -0.52
P01728 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
P01728 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
P01728 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
P01728 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
P01728 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
P01728 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
P01728 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P01728 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
P01728 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P01728 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
P01728 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
P01728 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
P01728 Mir6982-201ENSMUST00000184354 68 ntBASIC11.78□□□□□ -0.52
P01728 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
P01728 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P01728 Gm18032-201ENSMUST00000222541 538 ntBASIC11.78□□□□□ -0.52
P01728 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P01728 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P01728 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
P01728 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
P01728 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P01728 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC11.78□□□□□ -0.52
P01728 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P01728 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
P01728 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
P01728 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P01728 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P01728 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
P01728 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
P01728 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.52
P01728 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
P01728 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
P01728 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC11.77□□□□□ -0.52
P01728 Gm4081-201ENSMUST00000195287 1838 ntBASIC11.77□□□□□ -0.52
P01728 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC11.77□□□□□ -0.52
P01728 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
P01728 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
P01728 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
P01728 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
P01728 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
P01728 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
P01728 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
P01728 Gm15794-201ENSMUST00000120182 631 ntBASIC11.77□□□□□ -0.53
P01728 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC11.77□□□□□ -0.53
P01728 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC11.77□□□□□ -0.53
P01728 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
P01728 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
P01728 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
P01728 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms