Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sh2d1aO88890 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sh2d1aO88890 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sh2d1aO88890 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
Sh2d1aO88890 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sh2d1aO88890 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC10.67□□□□□ -0.7
Sh2d1aO88890 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sh2d1aO88890 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Sh2d1aO88890 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sh2d1aO88890 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sh2d1aO88890 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sh2d1aO88890 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sh2d1aO88890 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Sh2d1aO88890 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sh2d1aO88890 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC10.67□□□□□ -0.7
Sh2d1aO88890 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sh2d1aO88890 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC10.67□□□□□ -0.7
Sh2d1aO88890 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Sh2d1aO88890 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC10.67□□□□□ -0.7
Sh2d1aO88890 AC160980.1-201ENSMUST00000224136 970 ntBASIC10.67□□□□□ -0.7
Sh2d1aO88890 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sh2d1aO88890 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sh2d1aO88890 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sh2d1aO88890 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sh2d1aO88890 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sh2d1aO88890 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sh2d1aO88890 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC10.67□□□□□ -0.7
Sh2d1aO88890 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sh2d1aO88890 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sh2d1aO88890 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sh2d1aO88890 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sh2d1aO88890 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sh2d1aO88890 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Sh2d1aO88890 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC10.67□□□□□ -0.7
Sh2d1aO88890 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC10.67□□□□□ -0.7
Sh2d1aO88890 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sh2d1aO88890 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sh2d1aO88890 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sh2d1aO88890 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sh2d1aO88890 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sh2d1aO88890 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sh2d1aO88890 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Sh2d1aO88890 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sh2d1aO88890 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sh2d1aO88890 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sh2d1aO88890 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sh2d1aO88890 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sh2d1aO88890 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sh2d1aO88890 Gm5837-201ENSMUST00000191844 1369 ntBASIC10.66□□□□□ -0.7
Sh2d1aO88890 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sh2d1aO88890 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC10.66□□□□□ -0.7
Sh2d1aO88890 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
Sh2d1aO88890 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sh2d1aO88890 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sh2d1aO88890 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sh2d1aO88890 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Sh2d1aO88890 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sh2d1aO88890 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sh2d1aO88890 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Sh2d1aO88890 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
Sh2d1aO88890 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sh2d1aO88890 Gm7286-201ENSMUST00000182691 1007 ntBASIC10.66□□□□□ -0.7
Sh2d1aO88890 Gm10459-201ENSMUST00000202708 1155 ntBASIC10.66□□□□□ -0.7
Sh2d1aO88890 AC122024.2-201ENSMUST00000220086 871 ntBASIC10.66□□□□□ -0.7
Sh2d1aO88890 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sh2d1aO88890 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sh2d1aO88890 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Sh2d1aO88890 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Sh2d1aO88890 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sh2d1aO88890 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sh2d1aO88890 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sh2d1aO88890 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Sh2d1aO88890 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sh2d1aO88890 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sh2d1aO88890 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sh2d1aO88890 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Sh2d1aO88890 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sh2d1aO88890 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sh2d1aO88890 Gm10584-201ENSMUST00000207036 2628 ntBASIC10.66□□□□□ -0.7
Sh2d1aO88890 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sh2d1aO88890 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sh2d1aO88890 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sh2d1aO88890 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sh2d1aO88890 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sh2d1aO88890 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sh2d1aO88890 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Sh2d1aO88890 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sh2d1aO88890 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sh2d1aO88890 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC10.65□□□□□ -0.7
Sh2d1aO88890 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sh2d1aO88890 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sh2d1aO88890 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sh2d1aO88890 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sh2d1aO88890 AC148324.1-201ENSMUST00000219034 4240 ntBASIC10.65□□□□□ -0.7
Sh2d1aO88890 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sh2d1aO88890 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Sh2d1aO88890 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sh2d1aO88890 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sh2d1aO88890 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sh2d1aO88890 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms