Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Hcn3O88705 Carlr-201ENSMUST00000181515 2574 ntBASIC14.44□□□□□ -0.1
Hcn3O88705 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hcn3O88705 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hcn3O88705 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hcn3O88705 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Hcn3O88705 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Hcn3O88705 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hcn3O88705 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.44□□□□□ -0.1
Hcn3O88705 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hcn3O88705 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hcn3O88705 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.44□□□□□ -0.1
Hcn3O88705 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.44□□□□□ -0.1
Hcn3O88705 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hcn3O88705 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hcn3O88705 Gm7284-201ENSMUST00000131667 944 ntBASIC14.44□□□□□ -0.1
Hcn3O88705 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hcn3O88705 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Hcn3O88705 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.44□□□□□ -0.1
Hcn3O88705 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hcn3O88705 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hcn3O88705 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hcn3O88705 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hcn3O88705 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hcn3O88705 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hcn3O88705 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Hcn3O88705 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hcn3O88705 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hcn3O88705 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hcn3O88705 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Hcn3O88705 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hcn3O88705 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hcn3O88705 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hcn3O88705 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hcn3O88705 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.43□□□□□ -0.1
Hcn3O88705 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hcn3O88705 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.43□□□□□ -0.1
Hcn3O88705 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hcn3O88705 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hcn3O88705 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hcn3O88705 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hcn3O88705 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.43□□□□□ -0.1
Hcn3O88705 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.43□□□□□ -0.1
Hcn3O88705 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hcn3O88705 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hcn3O88705 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hcn3O88705 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hcn3O88705 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hcn3O88705 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Hcn3O88705 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Hcn3O88705 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hcn3O88705 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.43□□□□□ -0.1
Hcn3O88705 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.43□□□□□ -0.1
Hcn3O88705 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.43□□□□□ -0.1
Hcn3O88705 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hcn3O88705 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hcn3O88705 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hcn3O88705 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hcn3O88705 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Hcn3O88705 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.42□□□□□ -0.1
Hcn3O88705 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hcn3O88705 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Hcn3O88705 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hcn3O88705 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hcn3O88705 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.42□□□□□ -0.1
Hcn3O88705 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hcn3O88705 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hcn3O88705 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hcn3O88705 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hcn3O88705 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hcn3O88705 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hcn3O88705 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hcn3O88705 Gm14859-201ENSMUST00000117752 357 ntBASIC14.42□□□□□ -0.1
Hcn3O88705 Gm15794-201ENSMUST00000120182 631 ntBASIC14.42□□□□□ -0.1
Hcn3O88705 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.42□□□□□ -0.1
Hcn3O88705 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hcn3O88705 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hcn3O88705 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hcn3O88705 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hcn3O88705 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Hcn3O88705 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hcn3O88705 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hcn3O88705 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hcn3O88705 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
Hcn3O88705 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hcn3O88705 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hcn3O88705 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.42□□□□□ -0.1
Hcn3O88705 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hcn3O88705 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hcn3O88705 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hcn3O88705 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hcn3O88705 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hcn3O88705 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hcn3O88705 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hcn3O88705 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Hcn3O88705 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hcn3O88705 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.41□□□□□ -0.1
Hcn3O88705 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.41□□□□□ -0.1
Hcn3O88705 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hcn3O88705 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 113.3 ms