Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Cldn1O88551 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC12.92□□□□□ -0.34
Cldn1O88551 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cldn1O88551 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Cldn1O88551 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cldn1O88551 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cldn1O88551 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cldn1O88551 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cldn1O88551 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Cldn1O88551 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cldn1O88551 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cldn1O88551 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cldn1O88551 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cldn1O88551 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cldn1O88551 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cldn1O88551 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Cldn1O88551 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cldn1O88551 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC12.91□□□□□ -0.34
Cldn1O88551 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cldn1O88551 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cldn1O88551 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cldn1O88551 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cldn1O88551 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Cldn1O88551 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Cldn1O88551 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.91□□□□□ -0.34
Cldn1O88551 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.91□□□□□ -0.34
Cldn1O88551 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cldn1O88551 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.91□□□□□ -0.34
Cldn1O88551 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cldn1O88551 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Cldn1O88551 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Cldn1O88551 Gm2423-201ENSMUST00000074863 733 ntBASIC12.91□□□□□ -0.34
Cldn1O88551 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Cldn1O88551 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cldn1O88551 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cldn1O88551 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cldn1O88551 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cldn1O88551 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cldn1O88551 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cldn1O88551 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cldn1O88551 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.91□□□□□ -0.34
Cldn1O88551 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cldn1O88551 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cldn1O88551 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cldn1O88551 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Cldn1O88551 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cldn1O88551 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cldn1O88551 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Cldn1O88551 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cldn1O88551 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cldn1O88551 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cldn1O88551 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cldn1O88551 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cldn1O88551 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cldn1O88551 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cldn1O88551 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC12.9□□□□□ -0.34
Cldn1O88551 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cldn1O88551 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Cldn1O88551 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cldn1O88551 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cldn1O88551 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
Cldn1O88551 Gm13223-201ENSMUST00000118609 747 ntBASIC12.9□□□□□ -0.34
Cldn1O88551 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.9□□□□□ -0.34
Cldn1O88551 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cldn1O88551 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cldn1O88551 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cldn1O88551 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.9□□□□□ -0.34
Cldn1O88551 Gm18057-201ENSMUST00000208220 503 ntBASIC12.9□□□□□ -0.34
Cldn1O88551 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cldn1O88551 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.9□□□□□ -0.34
Cldn1O88551 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Cldn1O88551 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cldn1O88551 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Cldn1O88551 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cldn1O88551 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cldn1O88551 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cldn1O88551 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cldn1O88551 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cldn1O88551 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cldn1O88551 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cldn1O88551 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cldn1O88551 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cldn1O88551 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Cldn1O88551 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
Cldn1O88551 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Cldn1O88551 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.9□□□□□ -0.35
Cldn1O88551 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Cldn1O88551 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cldn1O88551 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cldn1O88551 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Cldn1O88551 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Cldn1O88551 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.89□□□□□ -0.35
Cldn1O88551 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Cldn1O88551 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cldn1O88551 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cldn1O88551 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.89□□□□□ -0.35
Cldn1O88551 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cldn1O88551 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Cldn1O88551 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cldn1O88551 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms