Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cops4O88544 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Cops4O88544 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cops4O88544 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cops4O88544 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Cops4O88544 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cops4O88544 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cops4O88544 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cops4O88544 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cops4O88544 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cops4O88544 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Cops4O88544 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cops4O88544 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cops4O88544 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.91□□□□□ -0.18
Cops4O88544 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cops4O88544 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Cops4O88544 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Cops4O88544 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cops4O88544 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cops4O88544 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cops4O88544 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cops4O88544 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cops4O88544 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cops4O88544 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cops4O88544 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cops4O88544 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cops4O88544 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cops4O88544 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cops4O88544 Gm23634-201ENSMUST00000175071 91 ntBASIC13.91□□□□□ -0.18
Cops4O88544 Gm17808-201ENSMUST00000200859 894 ntBASIC13.91□□□□□ -0.18
Cops4O88544 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.91□□□□□ -0.18
Cops4O88544 Gm45328-201ENSMUST00000210942 917 ntBASIC13.91□□□□□ -0.18
Cops4O88544 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cops4O88544 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cops4O88544 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cops4O88544 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cops4O88544 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cops4O88544 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Cops4O88544 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cops4O88544 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cops4O88544 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cops4O88544 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cops4O88544 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cops4O88544 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cops4O88544 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cops4O88544 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cops4O88544 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cops4O88544 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cops4O88544 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cops4O88544 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cops4O88544 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cops4O88544 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Cops4O88544 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cops4O88544 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
Cops4O88544 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cops4O88544 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cops4O88544 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Cops4O88544 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cops4O88544 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cops4O88544 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cops4O88544 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cops4O88544 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cops4O88544 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cops4O88544 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cops4O88544 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cops4O88544 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cops4O88544 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cops4O88544 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.9□□□□□ -0.18
Cops4O88544 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cops4O88544 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Cops4O88544 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cops4O88544 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cops4O88544 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Cops4O88544 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.9□□□□□ -0.18
Cops4O88544 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cops4O88544 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cops4O88544 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cops4O88544 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Cops4O88544 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.9□□□□□ -0.18
Cops4O88544 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Cops4O88544 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Cops4O88544 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
Cops4O88544 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Cops4O88544 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Cops4O88544 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.19
Cops4O88544 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cops4O88544 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cops4O88544 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cops4O88544 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cops4O88544 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cops4O88544 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cops4O88544 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cops4O88544 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Cops4O88544 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cops4O88544 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Cops4O88544 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cops4O88544 AA414768-201ENSMUST00000121924 1257 ntBASIC13.89□□□□□ -0.19
Cops4O88544 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cops4O88544 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Cops4O88544 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms