Protein–RNA interactions for Protein: O88520

Shoc2, Leucine-rich repeat protein SHOC-2, mousemouse

Known RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shoc2O88520 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Shoc2O88520 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Shoc2O88520 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Shoc2O88520 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Shoc2O88520 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.55■□□□□ 0.08
Shoc2O88520 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Shoc2O88520 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Shoc2O88520 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shoc2O88520 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Shoc2O88520 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shoc2O88520 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shoc2O88520 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
Shoc2O88520 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shoc2O88520 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shoc2O88520 Gm13036-201ENSMUST00000117799 748 ntBASIC15.54■□□□□ 0.08
Shoc2O88520 Gm12134-201ENSMUST00000122109 520 ntBASIC15.54■□□□□ 0.08
Shoc2O88520 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.54■□□□□ 0.08
Shoc2O88520 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Shoc2O88520 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.54■□□□□ 0.08
Shoc2O88520 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Shoc2O88520 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.54■□□□□ 0.08
Shoc2O88520 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shoc2O88520 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shoc2O88520 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shoc2O88520 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.54■□□□□ 0.08
Shoc2O88520 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shoc2O88520 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Shoc2O88520 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shoc2O88520 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shoc2O88520 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Shoc2O88520 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shoc2O88520 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shoc2O88520 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shoc2O88520 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.54■□□□□ 0.08
Shoc2O88520 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Shoc2O88520 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shoc2O88520 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shoc2O88520 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shoc2O88520 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Shoc2O88520 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.53■□□□□ 0.08
Shoc2O88520 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shoc2O88520 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shoc2O88520 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
Shoc2O88520 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Shoc2O88520 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shoc2O88520 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shoc2O88520 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Shoc2O88520 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Shoc2O88520 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shoc2O88520 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shoc2O88520 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shoc2O88520 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shoc2O88520 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shoc2O88520 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shoc2O88520 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.53■□□□□ 0.08
Shoc2O88520 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Shoc2O88520 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
Shoc2O88520 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Shoc2O88520 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.53■□□□□ 0.08
Shoc2O88520 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shoc2O88520 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shoc2O88520 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shoc2O88520 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.53■□□□□ 0.08
Shoc2O88520 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shoc2O88520 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shoc2O88520 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shoc2O88520 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shoc2O88520 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
Shoc2O88520 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Shoc2O88520 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Shoc2O88520 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Shoc2O88520 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.52■□□□□ 0.08
Shoc2O88520 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Shoc2O88520 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Shoc2O88520 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Shoc2O88520 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Shoc2O88520 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Shoc2O88520 Celf4-206ENSMUST00000224553 1729 ntBASIC15.52■□□□□ 0.08
Shoc2O88520 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Shoc2O88520 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Shoc2O88520 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Shoc2O88520 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Shoc2O88520 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Shoc2O88520 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Shoc2O88520 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Shoc2O88520 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Shoc2O88520 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Shoc2O88520 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.52■□□□□ 0.08
Shoc2O88520 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.52■□□□□ 0.08
Shoc2O88520 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.52■□□□□ 0.08
Shoc2O88520 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.52■□□□□ 0.08
Shoc2O88520 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.52■□□□□ 0.08
Shoc2O88520 Gm45167-201ENSMUST00000208007 322 ntBASIC15.52■□□□□ 0.08
Shoc2O88520 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.52■□□□□ 0.08
Shoc2O88520 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.52■□□□□ 0.08
Shoc2O88520 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Shoc2O88520 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Shoc2O88520 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Shoc2O88520 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.52■□□□□ 0.07
Shoc2O88520 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms