Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ubr1O70481 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ubr1O70481 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ubr1O70481 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ubr1O70481 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ubr1O70481 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ubr1O70481 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ubr1O70481 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Ubr1O70481 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ubr1O70481 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ubr1O70481 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ubr1O70481 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ubr1O70481 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ubr1O70481 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ubr1O70481 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ubr1O70481 Gm14928-201ENSMUST00000120198 477 ntBASIC19.26■□□□□ 0.67
Ubr1O70481 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ubr1O70481 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC19.26■□□□□ 0.67
Ubr1O70481 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ubr1O70481 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Ubr1O70481 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ubr1O70481 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ubr1O70481 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ubr1O70481 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Ubr1O70481 Gm14780-201ENSMUST00000118387 2737 ntBASIC19.25■□□□□ 0.67
Ubr1O70481 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ubr1O70481 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ubr1O70481 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ubr1O70481 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ubr1O70481 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ubr1O70481 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ubr1O70481 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Ubr1O70481 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Ubr1O70481 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ubr1O70481 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC19.25■□□□□ 0.67
Ubr1O70481 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ubr1O70481 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ubr1O70481 Gm6180-201ENSMUST00000065243 498 ntBASIC19.25■□□□□ 0.67
Ubr1O70481 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ubr1O70481 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ubr1O70481 Gm45667-201ENSMUST00000210380 1316 ntBASIC19.25■□□□□ 0.67
Ubr1O70481 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ubr1O70481 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ubr1O70481 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ubr1O70481 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Ubr1O70481 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ubr1O70481 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ubr1O70481 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Ubr1O70481 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ubr1O70481 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ubr1O70481 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ubr1O70481 Gm18624-201ENSMUST00000220966 658 ntBASIC19.24■□□□□ 0.67
Ubr1O70481 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC19.24■□□□□ 0.67
Ubr1O70481 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ubr1O70481 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ubr1O70481 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ubr1O70481 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ubr1O70481 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ubr1O70481 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ubr1O70481 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ubr1O70481 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Ubr1O70481 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC19.24■□□□□ 0.67
Ubr1O70481 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ubr1O70481 Gm45668-201ENSMUST00000211271 493 ntBASIC19.24■□□□□ 0.67
Ubr1O70481 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ubr1O70481 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Ubr1O70481 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ubr1O70481 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ubr1O70481 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.23■□□□□ 0.67
Ubr1O70481 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC19.23■□□□□ 0.67
Ubr1O70481 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ubr1O70481 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC19.23■□□□□ 0.67
Ubr1O70481 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ubr1O70481 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ubr1O70481 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ubr1O70481 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Ubr1O70481 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ubr1O70481 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC19.23■□□□□ 0.67
Ubr1O70481 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ubr1O70481 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ubr1O70481 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ubr1O70481 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ubr1O70481 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Ubr1O70481 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ubr1O70481 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ubr1O70481 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ubr1O70481 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ubr1O70481 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ubr1O70481 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ubr1O70481 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC19.22■□□□□ 0.67
Ubr1O70481 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC19.22■□□□□ 0.67
Ubr1O70481 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ubr1O70481 Gm6916-202ENSMUST00000205523 195 ntBASIC19.22■□□□□ 0.67
Ubr1O70481 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
Ubr1O70481 AC154239.3-201ENSMUST00000226933 674 ntBASIC19.22■□□□□ 0.67
Ubr1O70481 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ubr1O70481 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ubr1O70481 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ubr1O70481 Hivep3-201ENSMUST00000084306 2973 ntBASIC19.22■□□□□ 0.67
Ubr1O70481 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms