Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mmp8O70138 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Mmp8O70138 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mmp8O70138 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mmp8O70138 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Mmp8O70138 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mmp8O70138 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mmp8O70138 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.31■□□□□ 0.52
Mmp8O70138 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mmp8O70138 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mmp8O70138 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mmp8O70138 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mmp8O70138 Gm9768-201ENSMUST00000206007 2861 ntBASIC18.31■□□□□ 0.52
Mmp8O70138 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Mmp8O70138 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mmp8O70138 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mmp8O70138 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Mmp8O70138 CT025555.1-201ENSMUST00000225901 1217 ntBASIC18.31■□□□□ 0.52
Mmp8O70138 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mmp8O70138 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC18.31■□□□□ 0.52
Mmp8O70138 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Mmp8O70138 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Mmp8O70138 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mmp8O70138 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC18.31■□□□□ 0.52
Mmp8O70138 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Mmp8O70138 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Mmp8O70138 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mmp8O70138 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mmp8O70138 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Mmp8O70138 Gm13410-201ENSMUST00000117058 1415 ntBASIC18.31■□□□□ 0.52
Mmp8O70138 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mmp8O70138 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Mmp8O70138 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mmp8O70138 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mmp8O70138 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mmp8O70138 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mmp8O70138 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mmp8O70138 Gm6226-201ENSMUST00000117765 1146 ntBASIC18.3■□□□□ 0.52
Mmp8O70138 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC18.3■□□□□ 0.52
Mmp8O70138 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mmp8O70138 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mmp8O70138 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mmp8O70138 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Mmp8O70138 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mmp8O70138 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Mmp8O70138 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Mmp8O70138 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Mmp8O70138 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mmp8O70138 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mmp8O70138 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC18.29■□□□□ 0.52
Mmp8O70138 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mmp8O70138 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mmp8O70138 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mmp8O70138 Gm37728-201ENSMUST00000195025 2292 ntBASIC18.29■□□□□ 0.52
Mmp8O70138 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mmp8O70138 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mmp8O70138 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Mmp8O70138 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mmp8O70138 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mmp8O70138 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Mmp8O70138 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Mmp8O70138 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mmp8O70138 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Mmp8O70138 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC18.29■□□□□ 0.52
Mmp8O70138 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Mmp8O70138 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mmp8O70138 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mmp8O70138 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Mmp8O70138 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mmp8O70138 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mmp8O70138 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mmp8O70138 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mmp8O70138 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Mmp8O70138 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp8O70138 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp8O70138 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp8O70138 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp8O70138 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp8O70138 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp8O70138 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Mmp8O70138 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp8O70138 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC18.28■□□□□ 0.52
Mmp8O70138 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp8O70138 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC18.28■□□□□ 0.52
Mmp8O70138 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp8O70138 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC18.28■□□□□ 0.52
Mmp8O70138 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC18.28■□□□□ 0.52
Mmp8O70138 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp8O70138 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp8O70138 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp8O70138 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp8O70138 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp8O70138 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp8O70138 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp8O70138 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp8O70138 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp8O70138 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp8O70138 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp8O70138 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp8O70138 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms