Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC16.49■□□□□ 0.23
Trdmt1O55055 Gm44855-201ENSMUST00000205725 362 ntBASIC16.49■□□□□ 0.23
Trdmt1O55055 Syt7-205ENSMUST00000224135 1557 ntBASIC16.49■□□□□ 0.23
Trdmt1O55055 Shd-206ENSMUST00000225145 998 ntBASIC16.49■□□□□ 0.23
Trdmt1O55055 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trdmt1O55055 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trdmt1O55055 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trdmt1O55055 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trdmt1O55055 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.49■□□□□ 0.23
Trdmt1O55055 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trdmt1O55055 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trdmt1O55055 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trdmt1O55055 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trdmt1O55055 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trdmt1O55055 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trdmt1O55055 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trdmt1O55055 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trdmt1O55055 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Trdmt1O55055 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trdmt1O55055 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trdmt1O55055 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC16.48■□□□□ 0.23
Trdmt1O55055 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trdmt1O55055 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trdmt1O55055 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trdmt1O55055 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trdmt1O55055 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trdmt1O55055 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.48■□□□□ 0.23
Trdmt1O55055 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC16.48■□□□□ 0.23
Trdmt1O55055 AC124732.1-201ENSMUST00000221551 910 ntBASIC16.48■□□□□ 0.23
Trdmt1O55055 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC16.48■□□□□ 0.23
Trdmt1O55055 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trdmt1O55055 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Trdmt1O55055 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trdmt1O55055 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trdmt1O55055 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trdmt1O55055 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trdmt1O55055 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trdmt1O55055 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.48■□□□□ 0.23
Trdmt1O55055 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.48■□□□□ 0.23
Trdmt1O55055 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Trdmt1O55055 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trdmt1O55055 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trdmt1O55055 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trdmt1O55055 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trdmt1O55055 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trdmt1O55055 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Trdmt1O55055 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Trdmt1O55055 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trdmt1O55055 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trdmt1O55055 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trdmt1O55055 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trdmt1O55055 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trdmt1O55055 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Trdmt1O55055 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Trdmt1O55055 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trdmt1O55055 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trdmt1O55055 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16.47■□□□□ 0.23
Trdmt1O55055 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trdmt1O55055 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trdmt1O55055 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trdmt1O55055 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trdmt1O55055 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Trdmt1O55055 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trdmt1O55055 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trdmt1O55055 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trdmt1O55055 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trdmt1O55055 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trdmt1O55055 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trdmt1O55055 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trdmt1O55055 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trdmt1O55055 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trdmt1O55055 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trdmt1O55055 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trdmt1O55055 AC135669.1-201ENSMUST00000213585 412 ntBASIC16.46■□□□□ 0.23
Trdmt1O55055 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.46■□□□□ 0.23
Trdmt1O55055 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trdmt1O55055 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Trdmt1O55055 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trdmt1O55055 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
Trdmt1O55055 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trdmt1O55055 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trdmt1O55055 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC16.45■□□□□ 0.22
Trdmt1O55055 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Trdmt1O55055 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC16.45■□□□□ 0.22
Trdmt1O55055 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trdmt1O55055 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC16.45■□□□□ 0.22
Trdmt1O55055 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC16.45■□□□□ 0.22
Trdmt1O55055 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trdmt1O55055 Gm3365-201ENSMUST00000216296 1480 ntBASIC16.45■□□□□ 0.22
Trdmt1O55055 Tcf21-202ENSMUST00000218002 1788 ntBASIC16.45■□□□□ 0.22
Trdmt1O55055 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trdmt1O55055 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Trdmt1O55055 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trdmt1O55055 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Trdmt1O55055 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trdmt1O55055 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Trdmt1O55055 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.45■□□□□ 0.22
Trdmt1O55055 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Trdmt1O55055 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trdmt1O55055 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms