Protein–RNA interactions for Protein: O54949

Nlk, Serine/threonine-protein kinase NLK, mousemouse

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NlkO54949 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC13.5□□□□□ -0.25
NlkO54949 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NlkO54949 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
NlkO54949 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NlkO54949 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC13.5□□□□□ -0.25
NlkO54949 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NlkO54949 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NlkO54949 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NlkO54949 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NlkO54949 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NlkO54949 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NlkO54949 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NlkO54949 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
NlkO54949 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.5□□□□□ -0.25
NlkO54949 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NlkO54949 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NlkO54949 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NlkO54949 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NlkO54949 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NlkO54949 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
NlkO54949 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NlkO54949 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.49□□□□□ -0.25
NlkO54949 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
NlkO54949 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NlkO54949 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NlkO54949 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NlkO54949 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NlkO54949 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NlkO54949 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
NlkO54949 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NlkO54949 Gm15794-201ENSMUST00000120182 631 ntBASIC13.49□□□□□ -0.25
NlkO54949 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC13.49□□□□□ -0.25
NlkO54949 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NlkO54949 Gm27704-201ENSMUST00000185094 107 ntBASIC13.49□□□□□ -0.25
NlkO54949 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.49□□□□□ -0.25
NlkO54949 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC13.49□□□□□ -0.25
NlkO54949 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
NlkO54949 CT009713.7-201ENSMUST00000224689 571 ntBASIC13.49□□□□□ -0.25
NlkO54949 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.49□□□□□ -0.25
NlkO54949 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NlkO54949 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NlkO54949 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NlkO54949 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NlkO54949 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NlkO54949 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NlkO54949 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC13.49□□□□□ -0.25
NlkO54949 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NlkO54949 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
NlkO54949 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NlkO54949 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
NlkO54949 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NlkO54949 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NlkO54949 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
NlkO54949 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NlkO54949 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NlkO54949 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NlkO54949 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NlkO54949 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NlkO54949 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
NlkO54949 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NlkO54949 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
NlkO54949 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NlkO54949 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NlkO54949 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
NlkO54949 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NlkO54949 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
NlkO54949 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NlkO54949 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
NlkO54949 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NlkO54949 Gm14859-201ENSMUST00000117752 357 ntBASIC13.48□□□□□ -0.25
NlkO54949 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NlkO54949 Gm7284-201ENSMUST00000131667 944 ntBASIC13.48□□□□□ -0.25
NlkO54949 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.48□□□□□ -0.25
NlkO54949 Gm27742-201ENSMUST00000184667 60 ntBASIC13.48□□□□□ -0.25
NlkO54949 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NlkO54949 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NlkO54949 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
NlkO54949 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
NlkO54949 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NlkO54949 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NlkO54949 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.48□□□□□ -0.25
NlkO54949 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.48□□□□□ -0.25
NlkO54949 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
NlkO54949 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NlkO54949 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NlkO54949 Gm6858-201ENSMUST00000208582 1468 ntBASIC13.48□□□□□ -0.25
NlkO54949 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.48□□□□□ -0.25
NlkO54949 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
NlkO54949 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NlkO54949 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NlkO54949 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NlkO54949 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NlkO54949 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NlkO54949 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
NlkO54949 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
NlkO54949 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NlkO54949 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
NlkO54949 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
NlkO54949 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NlkO54949 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms