Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Per2O54943 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Per2O54943 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
Per2O54943 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Per2O54943 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Per2O54943 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Per2O54943 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Per2O54943 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Per2O54943 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Per2O54943 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Per2O54943 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Per2O54943 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Per2O54943 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Per2O54943 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.69■□□□□ 0.1
Per2O54943 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Per2O54943 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.69■□□□□ 0.1
Per2O54943 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Per2O54943 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Per2O54943 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Per2O54943 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Per2O54943 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Per2O54943 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Per2O54943 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Per2O54943 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Per2O54943 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Per2O54943 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Per2O54943 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Per2O54943 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Per2O54943 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Per2O54943 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Per2O54943 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Per2O54943 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.68■□□□□ 0.1
Per2O54943 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Per2O54943 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Per2O54943 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Per2O54943 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Per2O54943 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.68■□□□□ 0.1
Per2O54943 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Per2O54943 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Per2O54943 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Per2O54943 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Per2O54943 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Per2O54943 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Per2O54943 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.68■□□□□ 0.1
Per2O54943 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Per2O54943 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Per2O54943 Gm28659-201ENSMUST00000188013 759 ntBASIC15.68■□□□□ 0.1
Per2O54943 Gm5864-201ENSMUST00000202263 970 ntBASIC15.68■□□□□ 0.1
Per2O54943 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.68■□□□□ 0.1
Per2O54943 Gm10060-201ENSMUST00000212002 111 ntBASIC15.68■□□□□ 0.1
Per2O54943 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Per2O54943 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Per2O54943 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.68■□□□□ 0.1
Per2O54943 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Per2O54943 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Per2O54943 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Per2O54943 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Per2O54943 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Per2O54943 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Per2O54943 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Per2O54943 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Per2O54943 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Per2O54943 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.67■□□□□ 0.1
Per2O54943 Efs-202ENSMUST00000227037 2540 ntBASIC15.67■□□□□ 0.1
Per2O54943 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
Per2O54943 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Per2O54943 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Per2O54943 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Per2O54943 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Per2O54943 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Per2O54943 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.67■□□□□ 0.1
Per2O54943 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Per2O54943 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
Per2O54943 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.67■□□□□ 0.1
Per2O54943 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.67■□□□□ 0.1
Per2O54943 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.67■□□□□ 0.1
Per2O54943 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Per2O54943 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
Per2O54943 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.67■□□□□ 0.1
Per2O54943 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Per2O54943 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Per2O54943 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Per2O54943 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Per2O54943 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.67■□□□□ 0.1
Per2O54943 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Per2O54943 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Per2O54943 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Per2O54943 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Per2O54943 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.67■□□□□ 0.1
Per2O54943 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Per2O54943 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Per2O54943 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Per2O54943 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Per2O54943 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.66■□□□□ 0.1
Per2O54943 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.66■□□□□ 0.1
Per2O54943 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Per2O54943 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Per2O54943 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Per2O54943 Gm13884-201ENSMUST00000118103 829 ntBASIC15.66■□□□□ 0.1
Per2O54943 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms