Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccr6O54689 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.63□□□□□ -0.39
Ccr6O54689 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccr6O54689 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccr6O54689 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccr6O54689 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccr6O54689 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ccr6O54689 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Ccr6O54689 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccr6O54689 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccr6O54689 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccr6O54689 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccr6O54689 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccr6O54689 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.62□□□□□ -0.39
Ccr6O54689 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ccr6O54689 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.62□□□□□ -0.39
Ccr6O54689 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccr6O54689 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ccr6O54689 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.62□□□□□ -0.39
Ccr6O54689 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccr6O54689 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccr6O54689 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccr6O54689 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccr6O54689 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccr6O54689 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccr6O54689 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ccr6O54689 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Ccr6O54689 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccr6O54689 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC12.62□□□□□ -0.39
Ccr6O54689 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.62□□□□□ -0.39
Ccr6O54689 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.62□□□□□ -0.39
Ccr6O54689 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.62□□□□□ -0.39
Ccr6O54689 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.62□□□□□ -0.39
Ccr6O54689 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.62□□□□□ -0.39
Ccr6O54689 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.62□□□□□ -0.39
Ccr6O54689 Gm1818-201ENSMUST00000169406 1184 ntBASIC12.62□□□□□ -0.39
Ccr6O54689 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ccr6O54689 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.62□□□□□ -0.39
Ccr6O54689 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccr6O54689 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.62□□□□□ -0.39
Ccr6O54689 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.62□□□□□ -0.39
Ccr6O54689 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.62□□□□□ -0.39
Ccr6O54689 Gm8825-201ENSMUST00000182565 998 ntBASIC12.62□□□□□ -0.39
Ccr6O54689 Gm4518-201ENSMUST00000182638 718 ntBASIC12.62□□□□□ -0.39
Ccr6O54689 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.62□□□□□ -0.39
Ccr6O54689 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.62□□□□□ -0.39
Ccr6O54689 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.62□□□□□ -0.39
Ccr6O54689 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccr6O54689 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccr6O54689 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccr6O54689 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.62□□□□□ -0.39
Ccr6O54689 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.62□□□□□ -0.39
Ccr6O54689 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccr6O54689 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.62□□□□□ -0.39
Ccr6O54689 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.62□□□□□ -0.39
Ccr6O54689 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccr6O54689 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccr6O54689 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccr6O54689 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccr6O54689 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccr6O54689 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccr6O54689 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccr6O54689 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccr6O54689 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ccr6O54689 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ccr6O54689 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccr6O54689 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccr6O54689 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccr6O54689 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccr6O54689 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccr6O54689 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccr6O54689 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.62□□□□□ -0.39
Ccr6O54689 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccr6O54689 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccr6O54689 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccr6O54689 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccr6O54689 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccr6O54689 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccr6O54689 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccr6O54689 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccr6O54689 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccr6O54689 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccr6O54689 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Ccr6O54689 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccr6O54689 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.61□□□□□ -0.39
Ccr6O54689 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccr6O54689 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccr6O54689 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC12.61□□□□□ -0.39
Ccr6O54689 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Ccr6O54689 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC12.61□□□□□ -0.39
Ccr6O54689 Gm19164-201ENSMUST00000210667 640 ntBASIC12.61□□□□□ -0.39
Ccr6O54689 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.61□□□□□ -0.39
Ccr6O54689 AC130713.1-201ENSMUST00000228853 1096 ntBASIC12.61□□□□□ -0.39
Ccr6O54689 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC12.61□□□□□ -0.39
Ccr6O54689 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccr6O54689 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccr6O54689 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccr6O54689 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccr6O54689 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccr6O54689 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms