Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Matn3O35701 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Matn3O35701 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Matn3O35701 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Matn3O35701 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Matn3O35701 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Matn3O35701 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.71□□□□□ -0.21
Matn3O35701 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Matn3O35701 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Matn3O35701 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Matn3O35701 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Matn3O35701 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Matn3O35701 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Matn3O35701 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC13.71□□□□□ -0.21
Matn3O35701 Gm23634-201ENSMUST00000175071 91 ntBASIC13.71□□□□□ -0.21
Matn3O35701 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Matn3O35701 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.71□□□□□ -0.21
Matn3O35701 CT009713.7-201ENSMUST00000224689 571 ntBASIC13.71□□□□□ -0.21
Matn3O35701 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Matn3O35701 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Matn3O35701 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Matn3O35701 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Matn3O35701 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Matn3O35701 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Matn3O35701 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.71□□□□□ -0.22
Matn3O35701 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Matn3O35701 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Matn3O35701 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Matn3O35701 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
Matn3O35701 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Matn3O35701 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Matn3O35701 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Matn3O35701 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Matn3O35701 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Matn3O35701 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.7□□□□□ -0.22
Matn3O35701 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Matn3O35701 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Matn3O35701 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Matn3O35701 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.7□□□□□ -0.22
Matn3O35701 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Matn3O35701 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Matn3O35701 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC13.7□□□□□ -0.22
Matn3O35701 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Matn3O35701 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Matn3O35701 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Matn3O35701 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Matn3O35701 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Matn3O35701 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Matn3O35701 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.7□□□□□ -0.22
Matn3O35701 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Matn3O35701 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Matn3O35701 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Matn3O35701 Matn2-206ENSMUST00000228570 2798 ntBASIC13.69□□□□□ -0.22
Matn3O35701 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Matn3O35701 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Matn3O35701 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Matn3O35701 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.69□□□□□ -0.22
Matn3O35701 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Matn3O35701 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Matn3O35701 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Matn3O35701 Mir5130-201ENSMUST00000175160 84 ntBASIC13.69□□□□□ -0.22
Matn3O35701 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Matn3O35701 Gm44430-201ENSMUST00000203376 995 ntBASIC13.69□□□□□ -0.22
Matn3O35701 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Matn3O35701 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.69□□□□□ -0.22
Matn3O35701 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Matn3O35701 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Matn3O35701 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Matn3O35701 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Matn3O35701 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.69□□□□□ -0.22
Matn3O35701 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
Matn3O35701 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Matn3O35701 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Matn3O35701 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Matn3O35701 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Matn3O35701 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Matn3O35701 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Matn3O35701 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Matn3O35701 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Matn3O35701 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Matn3O35701 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Matn3O35701 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.68□□□□□ -0.22
Matn3O35701 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Matn3O35701 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Matn3O35701 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Matn3O35701 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Matn3O35701 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Matn3O35701 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Matn3O35701 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Matn3O35701 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Matn3O35701 AA414768-201ENSMUST00000121924 1257 ntBASIC13.68□□□□□ -0.22
Matn3O35701 Gm7213-201ENSMUST00000215977 950 ntBASIC13.68□□□□□ -0.22
Matn3O35701 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Matn3O35701 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Matn3O35701 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Matn3O35701 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Matn3O35701 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Matn3O35701 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Matn3O35701 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Matn3O35701 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms