Protein–RNA interactions for Protein: O35305

Tnfrsf11a, Tumor necrosis factor receptor superfamily member 11A, mousemouse

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11aO35305 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf11aO35305 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf11aO35305 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.18■□□□□ 0.18
Tnfrsf11aO35305 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf11aO35305 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf11aO35305 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf11aO35305 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf11aO35305 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf11aO35305 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf11aO35305 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.17■□□□□ 0.18
Tnfrsf11aO35305 Gm9385-201ENSMUST00000117563 472 ntBASIC16.17■□□□□ 0.18
Tnfrsf11aO35305 Gm14494-201ENSMUST00000118786 435 ntBASIC16.17■□□□□ 0.18
Tnfrsf11aO35305 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.17■□□□□ 0.18
Tnfrsf11aO35305 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.17■□□□□ 0.18
Tnfrsf11aO35305 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.17■□□□□ 0.18
Tnfrsf11aO35305 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC16.17■□□□□ 0.18
Tnfrsf11aO35305 Gm43514-201ENSMUST00000198852 424 ntBASIC16.17■□□□□ 0.18
Tnfrsf11aO35305 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Tnfrsf11aO35305 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf11aO35305 CT010506.4-201ENSMUST00000225457 351 ntBASIC16.17■□□□□ 0.18
Tnfrsf11aO35305 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf11aO35305 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf11aO35305 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf11aO35305 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf11aO35305 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC16.17■□□□□ 0.18
Tnfrsf11aO35305 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf11aO35305 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf11aO35305 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.17■□□□□ 0.18
Tnfrsf11aO35305 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf11aO35305 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Tnfrsf11aO35305 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Tnfrsf11aO35305 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf11aO35305 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf11aO35305 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf11aO35305 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf11aO35305 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf11aO35305 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf11aO35305 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf11aO35305 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf11aO35305 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Tnfrsf11aO35305 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf11aO35305 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf11aO35305 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf11aO35305 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf11aO35305 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC16.16■□□□□ 0.18
Tnfrsf11aO35305 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC16.16■□□□□ 0.18
Tnfrsf11aO35305 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf11aO35305 Gm4995-201ENSMUST00000117247 432 ntBASIC16.16■□□□□ 0.18
Tnfrsf11aO35305 Gm12892-201ENSMUST00000117367 1146 ntBASIC16.16■□□□□ 0.18
Tnfrsf11aO35305 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.16■□□□□ 0.18
Tnfrsf11aO35305 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf11aO35305 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf11aO35305 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC16.16■□□□□ 0.18
Tnfrsf11aO35305 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf11aO35305 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.16■□□□□ 0.18
Tnfrsf11aO35305 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf11aO35305 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf11aO35305 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf11aO35305 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf11aO35305 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf11aO35305 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf11aO35305 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf11aO35305 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf11aO35305 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf11aO35305 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf11aO35305 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf11aO35305 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf11aO35305 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf11aO35305 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Tnfrsf11aO35305 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf11aO35305 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf11aO35305 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf11aO35305 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf11aO35305 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf11aO35305 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf11aO35305 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf11aO35305 Gm15467-201ENSMUST00000120582 445 ntBASIC16.15■□□□□ 0.18
Tnfrsf11aO35305 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf11aO35305 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf11aO35305 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC16.15■□□□□ 0.18
Tnfrsf11aO35305 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Tnfrsf11aO35305 Gm44492-201ENSMUST00000197012 141 ntBASIC16.15■□□□□ 0.18
Tnfrsf11aO35305 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Tnfrsf11aO35305 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf11aO35305 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC16.15■□□□□ 0.18
Tnfrsf11aO35305 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf11aO35305 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Tnfrsf11aO35305 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf11aO35305 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Tnfrsf11aO35305 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Tnfrsf11aO35305 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Tnfrsf11aO35305 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf11aO35305 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf11aO35305 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf11aO35305 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf11aO35305 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfrsf11aO35305 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Tnfrsf11aO35305 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfrsf11aO35305 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfrsf11aO35305 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms