Protein–RNA interactions for Protein: O09111

Ndufb11, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial, mousemouse

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb11O09111 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ndufb11O09111 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ndufb11O09111 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ndufb11O09111 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ndufb11O09111 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ndufb11O09111 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ndufb11O09111 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ndufb11O09111 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ndufb11O09111 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ndufb11O09111 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ndufb11O09111 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Ndufb11O09111 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Ndufb11O09111 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ndufb11O09111 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ndufb11O09111 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ndufb11O09111 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ndufb11O09111 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ndufb11O09111 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ndufb11O09111 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ndufb11O09111 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ndufb11O09111 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.08□□□□□ -0.48
Ndufb11O09111 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ndufb11O09111 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ndufb11O09111 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ndufb11O09111 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Ndufb11O09111 Gm7290-201ENSMUST00000104990 617 ntBASIC12.08□□□□□ -0.48
Ndufb11O09111 Gm12821-201ENSMUST00000120022 600 ntBASIC12.08□□□□□ -0.48
Ndufb11O09111 Gm12918-201ENSMUST00000120234 636 ntBASIC12.08□□□□□ -0.48
Ndufb11O09111 Gm15710-201ENSMUST00000121821 636 ntBASIC12.08□□□□□ -0.48
Ndufb11O09111 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ndufb11O09111 Gm37292-201ENSMUST00000192062 758 ntBASIC12.08□□□□□ -0.48
Ndufb11O09111 Gm26524-201ENSMUST00000192339 390 ntBASIC12.08□□□□□ -0.48
Ndufb11O09111 Gm5075-201ENSMUST00000196916 622 ntBASIC12.08□□□□□ -0.48
Ndufb11O09111 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ndufb11O09111 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ndufb11O09111 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ndufb11O09111 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ndufb11O09111 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ndufb11O09111 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC12.08□□□□□ -0.48
Ndufb11O09111 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC12.08□□□□□ -0.48
Ndufb11O09111 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ndufb11O09111 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ndufb11O09111 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.08□□□□□ -0.48
Ndufb11O09111 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC12.08□□□□□ -0.48
Ndufb11O09111 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.08□□□□□ -0.48
Ndufb11O09111 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ndufb11O09111 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ndufb11O09111 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ndufb11O09111 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ndufb11O09111 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ndufb11O09111 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ndufb11O09111 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Ndufb11O09111 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.08□□□□□ -0.48
Ndufb11O09111 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ndufb11O09111 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ndufb11O09111 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ndufb11O09111 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ndufb11O09111 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ndufb11O09111 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ndufb11O09111 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufb11O09111 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ndufb11O09111 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ndufb11O09111 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufb11O09111 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC12.07□□□□□ -0.48
Ndufb11O09111 Gm15442-201ENSMUST00000117905 1527 ntBASIC12.07□□□□□ -0.48
Ndufb11O09111 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ndufb11O09111 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufb11O09111 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ndufb11O09111 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufb11O09111 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufb11O09111 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufb11O09111 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Ndufb11O09111 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufb11O09111 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC12.07□□□□□ -0.48
Ndufb11O09111 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Ndufb11O09111 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufb11O09111 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ndufb11O09111 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufb11O09111 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufb11O09111 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufb11O09111 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufb11O09111 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufb11O09111 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.07□□□□□ -0.48
Ndufb11O09111 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufb11O09111 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.07□□□□□ -0.48
Ndufb11O09111 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufb11O09111 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufb11O09111 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufb11O09111 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.07□□□□□ -0.48
Ndufb11O09111 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Ndufb11O09111 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ndufb11O09111 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufb11O09111 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufb11O09111 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Ndufb11O09111 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Ndufb11O09111 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.07□□□□□ -0.48
Ndufb11O09111 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufb11O09111 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufb11O09111 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.06□□□□□ -0.48
Ndufb11O09111 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms