Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ebf3O08791 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Ebf3O08791 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
Ebf3O08791 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ebf3O08791 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ebf3O08791 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ebf3O08791 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ebf3O08791 Gm9385-201ENSMUST00000117563 472 ntBASIC15.62■□□□□ 0.09
Ebf3O08791 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.62■□□□□ 0.09
Ebf3O08791 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ebf3O08791 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ebf3O08791 Rpph1-201ENSMUST00000175096 319 ntBASIC15.62■□□□□ 0.09
Ebf3O08791 Gm8318-201ENSMUST00000182954 872 ntBASIC15.62■□□□□ 0.09
Ebf3O08791 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Ebf3O08791 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.62■□□□□ 0.09
Ebf3O08791 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC15.62■□□□□ 0.09
Ebf3O08791 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.62■□□□□ 0.09
Ebf3O08791 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ebf3O08791 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ebf3O08791 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ebf3O08791 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ebf3O08791 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ebf3O08791 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ebf3O08791 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ebf3O08791 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ebf3O08791 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ebf3O08791 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ebf3O08791 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Ebf3O08791 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ebf3O08791 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ebf3O08791 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ebf3O08791 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ebf3O08791 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ebf3O08791 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ebf3O08791 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ebf3O08791 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Ebf3O08791 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ebf3O08791 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ebf3O08791 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ebf3O08791 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.61■□□□□ 0.09
Ebf3O08791 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.61■□□□□ 0.09
Ebf3O08791 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ebf3O08791 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ebf3O08791 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ebf3O08791 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ebf3O08791 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.61■□□□□ 0.09
Ebf3O08791 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ebf3O08791 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ebf3O08791 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.61■□□□□ 0.09
Ebf3O08791 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ebf3O08791 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.61■□□□□ 0.09
Ebf3O08791 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.61■□□□□ 0.09
Ebf3O08791 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ebf3O08791 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.61■□□□□ 0.09
Ebf3O08791 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.61■□□□□ 0.09
Ebf3O08791 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ebf3O08791 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ebf3O08791 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Ebf3O08791 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ebf3O08791 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ebf3O08791 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Ebf3O08791 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ebf3O08791 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ebf3O08791 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ebf3O08791 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ebf3O08791 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ebf3O08791 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ebf3O08791 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.61■□□□□ 0.09
Ebf3O08791 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ebf3O08791 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ebf3O08791 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ebf3O08791 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ebf3O08791 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ebf3O08791 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Ebf3O08791 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ebf3O08791 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ebf3O08791 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Ebf3O08791 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.6■□□□□ 0.09
Ebf3O08791 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.6■□□□□ 0.09
Ebf3O08791 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Ebf3O08791 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ebf3O08791 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC15.6■□□□□ 0.09
Ebf3O08791 Gm16198-201ENSMUST00000118766 670 ntBASIC15.6■□□□□ 0.09
Ebf3O08791 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC15.6■□□□□ 0.09
Ebf3O08791 Gm25948-201ENSMUST00000175334 112 ntBASIC15.6■□□□□ 0.09
Ebf3O08791 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC15.6■□□□□ 0.09
Ebf3O08791 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ebf3O08791 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ebf3O08791 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ebf3O08791 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ebf3O08791 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Ebf3O08791 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ebf3O08791 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ebf3O08791 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ebf3O08791 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ebf3O08791 Fgf17-202ENSMUST00000227123 1336 ntBASIC15.6■□□□□ 0.09
Ebf3O08791 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ebf3O08791 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.6■□□□□ 0.09
Ebf3O08791 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ebf3O08791 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms