Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Tcof1O08784 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tcof1O08784 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tcof1O08784 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Tcof1O08784 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.4
Tcof1O08784 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tcof1O08784 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tcof1O08784 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC17.57■□□□□ 0.4
Tcof1O08784 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tcof1O08784 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tcof1O08784 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Tcof1O08784 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tcof1O08784 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC17.57■□□□□ 0.4
Tcof1O08784 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tcof1O08784 CT025555.1-201ENSMUST00000225901 1217 ntBASIC17.57■□□□□ 0.4
Tcof1O08784 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tcof1O08784 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Tcof1O08784 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tcof1O08784 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tcof1O08784 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tcof1O08784 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tcof1O08784 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tcof1O08784 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tcof1O08784 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tcof1O08784 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tcof1O08784 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tcof1O08784 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tcof1O08784 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Tcof1O08784 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.57■□□□□ 0.4
Tcof1O08784 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tcof1O08784 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tcof1O08784 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tcof1O08784 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tcof1O08784 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.56■□□□□ 0.4
Tcof1O08784 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Tcof1O08784 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tcof1O08784 Gm15920-201ENSMUST00000118998 402 ntBASIC17.56■□□□□ 0.4
Tcof1O08784 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.56■□□□□ 0.4
Tcof1O08784 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC17.56■□□□□ 0.4
Tcof1O08784 Gm7063-201ENSMUST00000186840 981 ntBASIC17.56■□□□□ 0.4
Tcof1O08784 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tcof1O08784 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tcof1O08784 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tcof1O08784 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tcof1O08784 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Tcof1O08784 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tcof1O08784 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tcof1O08784 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tcof1O08784 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tcof1O08784 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tcof1O08784 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.56■□□□□ 0.4
Tcof1O08784 Gm11960-202ENSMUST00000181063 2858 ntBASIC17.56■□□□□ 0.4
Tcof1O08784 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tcof1O08784 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.56■□□□□ 0.4
Tcof1O08784 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tcof1O08784 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tcof1O08784 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tcof1O08784 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tcof1O08784 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tcof1O08784 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tcof1O08784 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tcof1O08784 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC17.55■□□□□ 0.4
Tcof1O08784 Gm11745-201ENSMUST00000121669 448 ntBASIC17.55■□□□□ 0.4
Tcof1O08784 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Tcof1O08784 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC17.55■□□□□ 0.4
Tcof1O08784 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC17.55■□□□□ 0.4
Tcof1O08784 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tcof1O08784 CT010506.4-201ENSMUST00000225457 351 ntBASIC17.55■□□□□ 0.4
Tcof1O08784 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Tcof1O08784 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Tcof1O08784 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tcof1O08784 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tcof1O08784 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.55■□□□□ 0.4
Tcof1O08784 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tcof1O08784 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC17.55■□□□□ 0.4
Tcof1O08784 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tcof1O08784 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tcof1O08784 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.55■□□□□ 0.4
Tcof1O08784 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tcof1O08784 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC17.55■□□□□ 0.4
Tcof1O08784 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC17.55■□□□□ 0.4
Tcof1O08784 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tcof1O08784 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tcof1O08784 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tcof1O08784 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tcof1O08784 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tcof1O08784 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tcof1O08784 Gm11025-201ENSMUST00000140773 466 ntBASIC17.54■□□□□ 0.4
Tcof1O08784 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tcof1O08784 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC17.54■□□□□ 0.4
Tcof1O08784 Gm27494-201ENSMUST00000184735 189 ntBASIC17.54■□□□□ 0.4
Tcof1O08784 Gm43767-201ENSMUST00000198933 381 ntBASIC17.54■□□□□ 0.4
Tcof1O08784 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC17.54■□□□□ 0.4
Tcof1O08784 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tcof1O08784 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tcof1O08784 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tcof1O08784 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tcof1O08784 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tcof1O08784 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tcof1O08784 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms