Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
B020004C17RikJ3QP07 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
B020004C17RikJ3QP07 Gm8749-201ENSMUST00000117737 331 ntBASIC16.71■□□□□ 0.27
B020004C17RikJ3QP07 Gm14042-201ENSMUST00000120139 833 ntBASIC16.71■□□□□ 0.27
B020004C17RikJ3QP07 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC16.71■□□□□ 0.27
B020004C17RikJ3QP07 Gm18018-201ENSMUST00000198273 408 ntBASIC16.71■□□□□ 0.27
B020004C17RikJ3QP07 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
B020004C17RikJ3QP07 Gm45453-201ENSMUST00000211758 853 ntBASIC16.71■□□□□ 0.27
B020004C17RikJ3QP07 AC130829.1-201ENSMUST00000221548 494 ntBASIC16.71■□□□□ 0.27
B020004C17RikJ3QP07 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
B020004C17RikJ3QP07 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
B020004C17RikJ3QP07 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
B020004C17RikJ3QP07 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
B020004C17RikJ3QP07 Gm10313-201ENSMUST00000095320 1002 ntBASIC16.71■□□□□ 0.27
B020004C17RikJ3QP07 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
B020004C17RikJ3QP07 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.71■□□□□ 0.27
B020004C17RikJ3QP07 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
B020004C17RikJ3QP07 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
B020004C17RikJ3QP07 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
B020004C17RikJ3QP07 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
B020004C17RikJ3QP07 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
B020004C17RikJ3QP07 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
B020004C17RikJ3QP07 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC16.7■□□□□ 0.26
B020004C17RikJ3QP07 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
B020004C17RikJ3QP07 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
B020004C17RikJ3QP07 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
B020004C17RikJ3QP07 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
B020004C17RikJ3QP07 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
B020004C17RikJ3QP07 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
B020004C17RikJ3QP07 Tcf21-202ENSMUST00000218002 1788 ntBASIC16.7■□□□□ 0.26
B020004C17RikJ3QP07 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.7■□□□□ 0.26
B020004C17RikJ3QP07 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
B020004C17RikJ3QP07 Gm4691-201ENSMUST00000182339 1000 ntBASIC16.7■□□□□ 0.26
B020004C17RikJ3QP07 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
B020004C17RikJ3QP07 Gm42612-201ENSMUST00000197986 623 ntBASIC16.7■□□□□ 0.26
B020004C17RikJ3QP07 Gm6745-201ENSMUST00000199216 526 ntBASIC16.7■□□□□ 0.26
B020004C17RikJ3QP07 Gm2451-201ENSMUST00000199447 999 ntBASIC16.7■□□□□ 0.26
B020004C17RikJ3QP07 Gm43170-201ENSMUST00000199827 612 ntBASIC16.7■□□□□ 0.26
B020004C17RikJ3QP07 Gm10290-201ENSMUST00000200451 999 ntBASIC16.7■□□□□ 0.26
B020004C17RikJ3QP07 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
B020004C17RikJ3QP07 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
B020004C17RikJ3QP07 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
B020004C17RikJ3QP07 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
B020004C17RikJ3QP07 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
B020004C17RikJ3QP07 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
B020004C17RikJ3QP07 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.7■□□□□ 0.26
B020004C17RikJ3QP07 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
B020004C17RikJ3QP07 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
B020004C17RikJ3QP07 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
B020004C17RikJ3QP07 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
B020004C17RikJ3QP07 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16.69■□□□□ 0.26
B020004C17RikJ3QP07 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
B020004C17RikJ3QP07 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
B020004C17RikJ3QP07 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
B020004C17RikJ3QP07 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.69■□□□□ 0.26
B020004C17RikJ3QP07 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
B020004C17RikJ3QP07 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
B020004C17RikJ3QP07 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
B020004C17RikJ3QP07 Trav13-3-201ENSMUST00000117226 336 ntBASIC16.69■□□□□ 0.26
B020004C17RikJ3QP07 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC16.69■□□□□ 0.26
B020004C17RikJ3QP07 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
B020004C17RikJ3QP07 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
B020004C17RikJ3QP07 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC16.69■□□□□ 0.26
B020004C17RikJ3QP07 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC16.69■□□□□ 0.26
B020004C17RikJ3QP07 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
B020004C17RikJ3QP07 Gm9229-201ENSMUST00000222777 126 ntBASIC16.69■□□□□ 0.26
B020004C17RikJ3QP07 AC156016.3-201ENSMUST00000228623 344 ntBASIC16.69■□□□□ 0.26
B020004C17RikJ3QP07 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
B020004C17RikJ3QP07 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
B020004C17RikJ3QP07 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
B020004C17RikJ3QP07 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC16.69■□□□□ 0.26
B020004C17RikJ3QP07 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
B020004C17RikJ3QP07 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
B020004C17RikJ3QP07 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
B020004C17RikJ3QP07 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.68■□□□□ 0.26
B020004C17RikJ3QP07 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
B020004C17RikJ3QP07 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
B020004C17RikJ3QP07 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
B020004C17RikJ3QP07 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
B020004C17RikJ3QP07 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
B020004C17RikJ3QP07 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
B020004C17RikJ3QP07 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
B020004C17RikJ3QP07 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
B020004C17RikJ3QP07 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
B020004C17RikJ3QP07 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
B020004C17RikJ3QP07 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
B020004C17RikJ3QP07 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC16.68■□□□□ 0.26
B020004C17RikJ3QP07 Gm23984-201ENSMUST00000157139 203 ntBASIC16.68■□□□□ 0.26
B020004C17RikJ3QP07 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC16.68■□□□□ 0.26
B020004C17RikJ3QP07 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
B020004C17RikJ3QP07 Gm45668-201ENSMUST00000211271 493 ntBASIC16.68■□□□□ 0.26
B020004C17RikJ3QP07 Gm15823-201ENSMUST00000064305 670 ntBASIC16.68■□□□□ 0.26
B020004C17RikJ3QP07 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
B020004C17RikJ3QP07 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
B020004C17RikJ3QP07 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
B020004C17RikJ3QP07 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
B020004C17RikJ3QP07 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
B020004C17RikJ3QP07 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
B020004C17RikJ3QP07 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
B020004C17RikJ3QP07 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms