Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh1F7BJK1 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh1F7BJK1 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh1F7BJK1 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh1F7BJK1 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh1F7BJK1 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh1F7BJK1 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Pcdh1F7BJK1 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh1F7BJK1 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.57□□□□□ -0.24
Pcdh1F7BJK1 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Pcdh1F7BJK1 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Pcdh1F7BJK1 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh1F7BJK1 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh1F7BJK1 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh1F7BJK1 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh1F7BJK1 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh1F7BJK1 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh1F7BJK1 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh1F7BJK1 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh1F7BJK1 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh1F7BJK1 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Pcdh1F7BJK1 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh1F7BJK1 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh1F7BJK1 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh1F7BJK1 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Pcdh1F7BJK1 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh1F7BJK1 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh1F7BJK1 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh1F7BJK1 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh1F7BJK1 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh1F7BJK1 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.55□□□□□ -0.24
Pcdh1F7BJK1 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh1F7BJK1 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh1F7BJK1 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh1F7BJK1 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
Pcdh1F7BJK1 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh1F7BJK1 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh1F7BJK1 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh1F7BJK1 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh1F7BJK1 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh1F7BJK1 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC13.55□□□□□ -0.24
Pcdh1F7BJK1 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh1F7BJK1 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh1F7BJK1 Gm25745-201ENSMUST00000174945 133 ntBASIC13.55□□□□□ -0.24
Pcdh1F7BJK1 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh1F7BJK1 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh1F7BJK1 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh1F7BJK1 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh1F7BJK1 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Pcdh1F7BJK1 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.55□□□□□ -0.24
Pcdh1F7BJK1 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Pcdh1F7BJK1 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.55□□□□□ -0.24
Pcdh1F7BJK1 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh1F7BJK1 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh1F7BJK1 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh1F7BJK1 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh1F7BJK1 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Pcdh1F7BJK1 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.55□□□□□ -0.24
Pcdh1F7BJK1 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh1F7BJK1 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh1F7BJK1 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh1F7BJK1 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh1F7BJK1 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh1F7BJK1 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.54□□□□□ -0.24
Pcdh1F7BJK1 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh1F7BJK1 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh1F7BJK1 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh1F7BJK1 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh1F7BJK1 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh1F7BJK1 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh1F7BJK1 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh1F7BJK1 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.54□□□□□ -0.24
Pcdh1F7BJK1 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Pcdh1F7BJK1 Gm12008-201ENSMUST00000117791 755 ntBASIC13.54□□□□□ -0.24
Pcdh1F7BJK1 Gm4459-201ENSMUST00000118750 468 ntBASIC13.54□□□□□ -0.24
Pcdh1F7BJK1 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh1F7BJK1 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
Pcdh1F7BJK1 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
Pcdh1F7BJK1 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
Pcdh1F7BJK1 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.54□□□□□ -0.24
Pcdh1F7BJK1 Gm7977-201ENSMUST00000193787 748 ntBASIC13.54□□□□□ -0.24
Pcdh1F7BJK1 Gm33142-201ENSMUST00000193913 867 ntBASIC13.54□□□□□ -0.24
Pcdh1F7BJK1 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.54□□□□□ -0.24
Pcdh1F7BJK1 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh1F7BJK1 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC13.54□□□□□ -0.24
Pcdh1F7BJK1 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Pcdh1F7BJK1 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh1F7BJK1 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh1F7BJK1 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh1F7BJK1 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh1F7BJK1 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh1F7BJK1 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh1F7BJK1 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh1F7BJK1 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh1F7BJK1 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.54□□□□□ -0.24
Pcdh1F7BJK1 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh1F7BJK1 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh1F7BJK1 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh1F7BJK1 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh1F7BJK1 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms