Protein–RNA interactions for Protein: F6ZDS4

Tpr, Nucleoprotein TPR, mousemouse

Known RBP Predictions only

Length 2,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TprF6ZDS4 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TprF6ZDS4 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TprF6ZDS4 AC122335.2-201ENSMUST00000213901 6181 ntBASIC13.83□□□□□ -0.2
TprF6ZDS4 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TprF6ZDS4 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TprF6ZDS4 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
TprF6ZDS4 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TprF6ZDS4 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.82□□□□□ -0.2
TprF6ZDS4 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TprF6ZDS4 Gm24158-201ENSMUST00000175263 71 ntBASIC13.82□□□□□ -0.2
TprF6ZDS4 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TprF6ZDS4 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TprF6ZDS4 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
TprF6ZDS4 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.82□□□□□ -0.2
TprF6ZDS4 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TprF6ZDS4 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TprF6ZDS4 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TprF6ZDS4 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TprF6ZDS4 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TprF6ZDS4 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TprF6ZDS4 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TprF6ZDS4 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
TprF6ZDS4 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TprF6ZDS4 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TprF6ZDS4 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
TprF6ZDS4 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TprF6ZDS4 Gm12176-201ENSMUST00000121420 875 ntBASIC13.82□□□□□ -0.2
TprF6ZDS4 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TprF6ZDS4 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.82□□□□□ -0.2
TprF6ZDS4 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
TprF6ZDS4 Gm18049-201ENSMUST00000208909 581 ntBASIC13.82□□□□□ -0.2
TprF6ZDS4 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.82□□□□□ -0.2
TprF6ZDS4 Gm9908-201ENSMUST00000211534 448 ntBASIC13.82□□□□□ -0.2
TprF6ZDS4 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TprF6ZDS4 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
TprF6ZDS4 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.82□□□□□ -0.2
TprF6ZDS4 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TprF6ZDS4 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TprF6ZDS4 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TprF6ZDS4 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TprF6ZDS4 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TprF6ZDS4 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TprF6ZDS4 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TprF6ZDS4 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TprF6ZDS4 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TprF6ZDS4 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TprF6ZDS4 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
TprF6ZDS4 Gm13015-201ENSMUST00000118674 204 ntBASIC13.81□□□□□ -0.2
TprF6ZDS4 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.81□□□□□ -0.2
TprF6ZDS4 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TprF6ZDS4 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TprF6ZDS4 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.81□□□□□ -0.2
TprF6ZDS4 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.81□□□□□ -0.2
TprF6ZDS4 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TprF6ZDS4 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TprF6ZDS4 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
TprF6ZDS4 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TprF6ZDS4 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TprF6ZDS4 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.81□□□□□ -0.2
TprF6ZDS4 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
TprF6ZDS4 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TprF6ZDS4 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TprF6ZDS4 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TprF6ZDS4 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.81□□□□□ -0.2
TprF6ZDS4 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.81□□□□□ -0.2
TprF6ZDS4 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
TprF6ZDS4 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.81□□□□□ -0.2
TprF6ZDS4 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TprF6ZDS4 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TprF6ZDS4 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TprF6ZDS4 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
TprF6ZDS4 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
TprF6ZDS4 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TprF6ZDS4 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TprF6ZDS4 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TprF6ZDS4 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TprF6ZDS4 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
TprF6ZDS4 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TprF6ZDS4 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TprF6ZDS4 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TprF6ZDS4 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.8□□□□□ -0.2
TprF6ZDS4 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TprF6ZDS4 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TprF6ZDS4 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TprF6ZDS4 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.8□□□□□ -0.2
TprF6ZDS4 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
TprF6ZDS4 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TprF6ZDS4 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TprF6ZDS4 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.8□□□□□ -0.2
TprF6ZDS4 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TprF6ZDS4 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TprF6ZDS4 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TprF6ZDS4 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TprF6ZDS4 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TprF6ZDS4 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TprF6ZDS4 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TprF6ZDS4 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.8□□□□□ -0.2
TprF6ZDS4 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TprF6ZDS4 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TprF6ZDS4 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms