Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Pcdhb9E9Q5G2 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Pcdhb9E9Q5G2 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC17.67■□□□□ 0.42
Pcdhb9E9Q5G2 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.67■□□□□ 0.42
Pcdhb9E9Q5G2 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb9E9Q5G2 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb9E9Q5G2 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb9E9Q5G2 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb9E9Q5G2 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb9E9Q5G2 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb9E9Q5G2 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Pcdhb9E9Q5G2 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb9E9Q5G2 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
Pcdhb9E9Q5G2 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb9E9Q5G2 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.67■□□□□ 0.42
Pcdhb9E9Q5G2 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb9E9Q5G2 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb9E9Q5G2 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb9E9Q5G2 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb9E9Q5G2 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb9E9Q5G2 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb9E9Q5G2 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb9E9Q5G2 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb9E9Q5G2 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb9E9Q5G2 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb9E9Q5G2 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb9E9Q5G2 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Pcdhb9E9Q5G2 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb9E9Q5G2 Gm6973-201ENSMUST00000117080 721 ntBASIC17.66■□□□□ 0.42
Pcdhb9E9Q5G2 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC17.66■□□□□ 0.42
Pcdhb9E9Q5G2 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC17.66■□□□□ 0.42
Pcdhb9E9Q5G2 Gm15483-201ENSMUST00000120338 456 ntBASIC17.66■□□□□ 0.42
Pcdhb9E9Q5G2 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb9E9Q5G2 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb9E9Q5G2 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb9E9Q5G2 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC17.66■□□□□ 0.42
Pcdhb9E9Q5G2 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC17.66■□□□□ 0.42
Pcdhb9E9Q5G2 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb9E9Q5G2 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb9E9Q5G2 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb9E9Q5G2 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb9E9Q5G2 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb9E9Q5G2 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb9E9Q5G2 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb9E9Q5G2 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb9E9Q5G2 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Pcdhb9E9Q5G2 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb9E9Q5G2 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb9E9Q5G2 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Pcdhb9E9Q5G2 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Pcdhb9E9Q5G2 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC17.66■□□□□ 0.42
Pcdhb9E9Q5G2 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb9E9Q5G2 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb9E9Q5G2 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Pcdhb9E9Q5G2 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb9E9Q5G2 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb9E9Q5G2 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb9E9Q5G2 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Pcdhb9E9Q5G2 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb9E9Q5G2 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb9E9Q5G2 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb9E9Q5G2 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb9E9Q5G2 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb9E9Q5G2 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb9E9Q5G2 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb9E9Q5G2 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
Pcdhb9E9Q5G2 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Pcdhb9E9Q5G2 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Pcdhb9E9Q5G2 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC17.65■□□□□ 0.42
Pcdhb9E9Q5G2 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb9E9Q5G2 Rprl2-201ENSMUST00000157150 290 ntBASIC17.65■□□□□ 0.42
Pcdhb9E9Q5G2 Gm26308-201ENSMUST00000157768 69 ntBASIC17.65■□□□□ 0.42
Pcdhb9E9Q5G2 Gm18057-201ENSMUST00000208220 503 ntBASIC17.65■□□□□ 0.42
Pcdhb9E9Q5G2 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb9E9Q5G2 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb9E9Q5G2 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Pcdhb9E9Q5G2 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb9E9Q5G2 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC17.65■□□□□ 0.42
Pcdhb9E9Q5G2 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb9E9Q5G2 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.65■□□□□ 0.42
Pcdhb9E9Q5G2 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb9E9Q5G2 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb9E9Q5G2 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb9E9Q5G2 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb9E9Q5G2 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Pcdhb9E9Q5G2 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdhb9E9Q5G2 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
Pcdhb9E9Q5G2 Gm13233-201ENSMUST00000118760 1443 ntBASIC17.64■□□□□ 0.42
Pcdhb9E9Q5G2 Gm13244-201ENSMUST00000118855 1446 ntBASIC17.64■□□□□ 0.42
Pcdhb9E9Q5G2 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdhb9E9Q5G2 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Pcdhb9E9Q5G2 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb9E9Q5G2 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb9E9Q5G2 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb9E9Q5G2 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb9E9Q5G2 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC17.64■□□□□ 0.41
Pcdhb9E9Q5G2 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb9E9Q5G2 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.64■□□□□ 0.41
Pcdhb9E9Q5G2 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC17.64■□□□□ 0.41
Pcdhb9E9Q5G2 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms