Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.81□□□□□ -0.04
Col6a3E9PWQ3 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.81□□□□□ -0.04
Col6a3E9PWQ3 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Col6a3E9PWQ3 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a3E9PWQ3 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a3E9PWQ3 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Col6a3E9PWQ3 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a3E9PWQ3 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a3E9PWQ3 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC14.81□□□□□ -0.04
Col6a3E9PWQ3 Gm17376-201ENSMUST00000166016 84 ntBASIC14.81□□□□□ -0.04
Col6a3E9PWQ3 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC14.81□□□□□ -0.04
Col6a3E9PWQ3 AC133598.1-201ENSMUST00000224327 660 ntBASIC14.81□□□□□ -0.04
Col6a3E9PWQ3 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a3E9PWQ3 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a3E9PWQ3 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.81□□□□□ -0.04
Col6a3E9PWQ3 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a3E9PWQ3 CT030182.1-201ENSMUST00000225935 533 ntBASIC14.81□□□□□ -0.04
Col6a3E9PWQ3 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC14.81□□□□□ -0.04
Col6a3E9PWQ3 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a3E9PWQ3 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a3E9PWQ3 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a3E9PWQ3 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Col6a3E9PWQ3 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a3E9PWQ3 Gm6222-201ENSMUST00000120787 396 ntBASIC14.8□□□□□ -0.04
Col6a3E9PWQ3 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a3E9PWQ3 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Col6a3E9PWQ3 Gm4819-201ENSMUST00000182170 1009 ntBASIC14.8□□□□□ -0.04
Col6a3E9PWQ3 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a3E9PWQ3 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC14.8□□□□□ -0.04
Col6a3E9PWQ3 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
Col6a3E9PWQ3 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a3E9PWQ3 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a3E9PWQ3 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a3E9PWQ3 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a3E9PWQ3 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a3E9PWQ3 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a3E9PWQ3 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a3E9PWQ3 Gm17823-201ENSMUST00000217830 1006 ntBASIC14.8□□□□□ -0.04
Col6a3E9PWQ3 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Col6a3E9PWQ3 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC14.8□□□□□ -0.04
Col6a3E9PWQ3 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a3E9PWQ3 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.8□□□□□ -0.04
Col6a3E9PWQ3 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Col6a3E9PWQ3 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Col6a3E9PWQ3 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col6a3E9PWQ3 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col6a3E9PWQ3 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col6a3E9PWQ3 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col6a3E9PWQ3 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col6a3E9PWQ3 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col6a3E9PWQ3 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC14.79□□□□□ -0.04
Col6a3E9PWQ3 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col6a3E9PWQ3 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Col6a3E9PWQ3 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col6a3E9PWQ3 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col6a3E9PWQ3 Gm12201-201ENSMUST00000120657 1234 ntBASIC14.79□□□□□ -0.04
Col6a3E9PWQ3 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col6a3E9PWQ3 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC14.79□□□□□ -0.04
Col6a3E9PWQ3 Gm5279-201ENSMUST00000199575 745 ntBASIC14.79□□□□□ -0.04
Col6a3E9PWQ3 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC14.79□□□□□ -0.04
Col6a3E9PWQ3 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col6a3E9PWQ3 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.79□□□□□ -0.04
Col6a3E9PWQ3 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Col6a3E9PWQ3 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col6a3E9PWQ3 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col6a3E9PWQ3 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC14.79□□□□□ -0.04
Col6a3E9PWQ3 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col6a3E9PWQ3 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.79□□□□□ -0.04
Col6a3E9PWQ3 Gm29396-201ENSMUST00000185659 716 ntBASIC14.79□□□□□ -0.04
Col6a3E9PWQ3 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.79□□□□□ -0.04
Col6a3E9PWQ3 Gm9368-201ENSMUST00000219348 831 ntBASIC14.79□□□□□ -0.04
Col6a3E9PWQ3 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a3E9PWQ3 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.78□□□□□ -0.04
Col6a3E9PWQ3 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a3E9PWQ3 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a3E9PWQ3 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC14.78□□□□□ -0.04
Col6a3E9PWQ3 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a3E9PWQ3 Gm14267-206ENSMUST00000226870 1209 ntBASIC14.78□□□□□ -0.04
Col6a3E9PWQ3 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a3E9PWQ3 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a3E9PWQ3 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC14.78□□□□□ -0.04
Col6a3E9PWQ3 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a3E9PWQ3 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a3E9PWQ3 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a3E9PWQ3 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.78□□□□□ -0.04
Col6a3E9PWQ3 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a3E9PWQ3 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a3E9PWQ3 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a3E9PWQ3 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a3E9PWQ3 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC14.78□□□□□ -0.04
Col6a3E9PWQ3 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.78□□□□□ -0.04
Col6a3E9PWQ3 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Col6a3E9PWQ3 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Col6a3E9PWQ3 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col6a3E9PWQ3 Gm16177-201ENSMUST00000120728 718 ntBASIC14.77□□□□□ -0.04
Col6a3E9PWQ3 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC14.77□□□□□ -0.04
Col6a3E9PWQ3 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col6a3E9PWQ3 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col6a3E9PWQ3 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col6a3E9PWQ3 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms